chr1 : 10,663,711 10,663,965
254 bp 94 TFs 0 linked genes
This 254 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:10,658,711 – 10,668,965
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AR 2 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 132 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 163 bp overlap
ARID2 2 datasets
ChIP NGP GSE134626.ARID2.NGP 181 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 242 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 238 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 114 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 254 bp overlap
BRD4 5 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 254 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 185 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 254 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 254 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 254 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 243 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 103 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 217 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 254 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 122 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 254 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 254 bp overlap
CTCF 9 datasets
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 107 bp overlap
ChIP adrenal gland ENCFF282ZUL 254 bp overlap
ChIP adrenal gland ENCFF678WUB 254 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 254 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 195 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 254 bp overlap
ChIP gastroesophageal sphincter ENCFF582GAX 254 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 134 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 161 bp overlap
DNMT3B 2 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 254 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 254 bp overlap
EGR1 4 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 153 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 185 bp overlap
ChIP K562 ENCFF006PJY 207 bp overlap
ChIP liver ENCSR290ZOS.EGR1.liver 125 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 254 bp overlap
EHMT2 1 dataset
ChIP Rh41 GSE118666.EHMT2.Rh41 236 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 119 bp overlap
ESR1 4 datasets
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 176 bp overlap
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 254 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 254 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 254 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 254 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 149 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 254 bp overlap
GABPA 2 datasets
ChIP H1 ENCFF739QFD 239 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 254 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 135 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 117 bp overlap
HDGF 1 dataset
ChIP HEK293T ENCSR522LDJ.HDGF.HEK293T 162 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 198 bp overlap
HMGN3 1 dataset
ChIP K-562 ENCSR000DOB.HMGN3.K-562 175 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF449HPV 254 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 95 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 254 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 147 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 54 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 227 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 137 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 188 bp overlap
MAFK 1 dataset
ChIP IMR-90 ENCFF336DHZ 205 bp overlap
MAX 1 dataset
ChIP liver ENCSR847DIT.MAX.liver 176 bp overlap
MAZ 3 datasets
ChIP HEK293 GSE76494.MAZ.HEK293 193 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 171 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 168 bp overlap
MED1 6 datasets
ChIP G296S GSE85628.MED1.G296S 185 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 185 bp overlap
ChIP G296S_4 GSE85628.MED1.G296S_4 236 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 240 bp overlap
ChIP SGBS GSE64233.MED1.SGBS 236 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 171 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 87 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 254 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 194 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 130 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 240 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94782.MYCN.Kelly 215 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 222 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 206 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 254 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 186 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 254 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 233 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 199 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 254 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 254 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 254 bp overlap
PCBP1 6 datasets
ChIP K-562 ENCSR052PTN.PCBP1.K-562 252 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 240 bp overlap
ChIP K562 ENCFF121LOV 254 bp overlap
ChIP K562 ENCFF121LOV 208 bp overlap
ChIP K562 ENCFF382QWQ 254 bp overlap
ChIP K562 ENCFF382QWQ 175 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 224 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 193 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 254 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 73 bp overlap
POLR2A 37 datasets
ChIP adrenal gland ENCFF843OBJ 254 bp overlap
ChIP body of pancreas ENCFF727UBE 254 bp overlap
ChIP esophagus muscularis mucosa ENCFF432ZCY 173 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 164 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 254 bp overlap
ChIP esophagus squamous epithelium ENCFF297FPP 254 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 175 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 170 bp overlap
ChIP gastroesophageal sphincter ENCFF043KAM 76 bp overlap
ChIP gastroesophageal sphincter ENCFF043KAM 246 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 213 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 178 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 119 bp overlap
ChIP gastroesophageal sphincter ENCFF461UHJ 246 bp overlap
ChIP gastroesophageal sphincter ENCFF461UHJ 218 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 254 bp overlap
ChIP heart left ventricle ENCFF206JCD 134 bp overlap
ChIP heart left ventricle ENCFF591JWH 230 bp overlap
ChIP prostate gland ENCFF545MVF 254 bp overlap
ChIP prostate gland ENCFF881OMH 152 bp overlap
ChIP right lobe of liver ENCFF026NCK 254 bp overlap
ChIP sigmoid colon ENCFF101ILL 228 bp overlap
ChIP sigmoid colon ENCFF543ARF 237 bp overlap
ChIP sigmoid colon ENCFF543ARF 192 bp overlap
ChIP sigmoid colon ENCFF653CQA 254 bp overlap
ChIP sigmoid colon ENCFF661AMI 65 bp overlap
ChIP sigmoid colon ENCFF725QFT 254 bp overlap
ChIP sigmoid colon ENCFF748YVT 254 bp overlap
ChIP sigmoid colon ENCFF754JQR 251 bp overlap
ChIP stomach ENCFF278MYS 220 bp overlap
ChIP stomach ENCFF607ZPU 225 bp overlap
ChIP stomach ENCFF820WZN 248 bp overlap
ChIP transverse colon ENCFF607LKE 242 bp overlap
ChIP transverse colon ENCFF607LKE 177 bp overlap
ChIP upper lobe of left lung ENCFF095BJW 218 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 237 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 254 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 251 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 157 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 221 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 184 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 95 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 76 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 112 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 254 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 168 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 58 bp overlap
REST 1 dataset
ChIP liver ENCSR867WPH.REST.liver 175 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 254 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 181 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 254 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 236 bp overlap
SMARCA4 4 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 160 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 218 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 167 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 216 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 254 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 148 bp overlap
SP1 3 datasets
ChIP HEK293 GSE76494.SP1.HEK293 234 bp overlap
ChIP liver ENCFF597LFJ 160 bp overlap
ChIP liver ENCFF769YSM 254 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 229 bp overlap
SREBP2 1 dataset
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 254 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 254 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 254 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 149 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 148 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 53 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 206 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 236 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 254 bp overlap
TP63 2 datasets
ChIP keratinocyte GSE33571.TP63.keratinocyte 52 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 118 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 254 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 225 bp overlap
ChIP HEK293 ENCFF582MWI 254 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 65 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 247 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 241 bp overlap
ZBTB7A 3 datasets
ChIP Ishikawa ENCFF191NFH 254 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 146 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 145 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 254 bp overlap
ZFX 2 datasets
ChIP C4-2B ENCFF652WZM 119 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 254 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 254 bp overlap