chr4 : 151,048,986 151,049,930
944 bp 85 TFs 4 linked genes
This 944 bp open chromatin element is linked to 4 target genes and is bound by 85 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
LRBA 33.9 kb Distal Multiome
RPS3A 50.0 kb Distal Multiome
PRSS48 227.5 kb Distal Multiome
SH3D19 276.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:151,043,986 – 151,054,930
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 692 bp overlap
ChIP H1 ENCFF399KAM 493 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 834 bp overlap
ATF2 3 datasets
ChIP H1 ENCFF295GZO 415 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 204 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 238 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 321 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 206 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 144 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 147 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 157 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 173 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 510 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 232 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 383 bp overlap
BRD4 2 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 119 bp overlap
ChIP hESC GSE33281.BRD4.hESC 124 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 197 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 123 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 124 bp overlap
CHD2 3 datasets
ChIP H1 ENCFF991MKH 331 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 241 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 175 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 263 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 145 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 499 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 413 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 198 bp overlap
ChIP BLaER1 ENCFF335XTP 279 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 140 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 154 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 294 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 195 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 255 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 119 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 525 bp overlap
GATA6 2 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 291 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 282 bp overlap
GLI3 1 dataset
Motif ES_0h ES_0h-GLI3_MA1491.3 15 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 391 bp overlap
HDAC2 5 datasets
ChIP H1 ENCFF353UJQ 645 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 140 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 179 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 233 bp overlap
HES6 1 dataset
Motif DE_12h DE_12h-HES6_MA1493.1 10 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
INSM1 1 dataset
Motif ES_0h ES_0h-INSM1_MA0155.1 12 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 179 bp overlap
KDM4A 2 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 150 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 170 bp overlap
KLF4 1 dataset
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WTC11 ENCFF223QFY 318 bp overlap
ChIP WTC11 ENCFF223QFY 561 bp overlap
MAZ 1 dataset
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 181 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 470 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 253 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 231 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 274 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 444 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 314 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 198 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 193 bp overlap
PHF8 3 datasets
ChIP H1 ENCFF427UFV 581 bp overlap
ChIP H1 ENCFF427UFV 581 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 294 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 242 bp overlap
ChIP H1 ENCFF566JSR 471 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF833NJP 305 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 465 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 374 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 453 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 211 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 376 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 404 bp overlap
Pgr 2 datasets
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
RBBP5 4 datasets
ChIP H1 ENCFF905HFL 671 bp overlap
ChIP H1 ENCFF905HFL 534 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 262 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 208 bp overlap
REST 2 datasets
ChIP H1 ENCFF429RUE 213 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 170 bp overlap
SIN3A 4 datasets
ChIP WA01 ENCSR000BIS.SIN3A.WA01 141 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 125 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 222 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 237 bp overlap
SIX5 1 dataset
ChIP H1 ENCFF942SOJ 237 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 214 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 342 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 248 bp overlap
ChIP WTC11 ENCFF688PEU 404 bp overlap
SP4 3 datasets
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 133 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 191 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 333 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 124 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 682 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 337 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 221 bp overlap
TBP 10 datasets
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
ChIP H1 ENCFF859IIO 220 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 675 bp overlap
ChIP hESC GSE122298.TBP.hESC 397 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 171 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 373 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 115 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 438 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 342 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 195 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 180 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 597 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 325 bp overlap
TEAD4 3 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 500 bp overlap
ChIP H1 ENCFF778PAX 183 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 281 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 516 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 285 bp overlap
TFAP2E 1 dataset
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 327 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 134 bp overlap
YAP1 1 dataset
ChIP WA01 GSE99202.YAP1.WA01 271 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 194 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 179 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 134 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 306 bp overlap
ZBTB33 3 datasets
ChIP HepG2 ENCFF778UKV 268 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 552 bp overlap
ChIP K562 ENCFF875HLX 359 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 311 bp overlap
ZKSCAN8 1 dataset
ChIP WTC11 ENCFF666HNJ 308 bp overlap
ZNF114 2 datasets
ChIP GM23338 ENCFF631OSW 357 bp overlap
ChIP GM23338 ENCSR555KFE.ZNF114.GM23338 336 bp overlap
ZNF140 1 dataset
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF143 2 datasets
ChIP WA01 ENCSR000EBW.ZNF143.WA01 126 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 129 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF274 2 datasets
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
Motif ES_0h ES_0h-ZNF274_MA1592.2 12 bp overlap
ZNF281 1 dataset
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 211 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 200 bp overlap
ZNF610 1 dataset
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap