chr4 : 124,738,737 124,739,376
639 bp 112 TFs 0 linked genes
This 639 bp open chromatin element has no linked target genes and is bound by 112 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:124,733,737 – 124,744,376
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
112 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 215 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 503 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 269 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BCL11A 2 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 155 bp overlap
CHD7 3 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 224 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 191 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 386 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 277 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 377 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EHF 2 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF3 2 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 139 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
Erg 2 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
GCM2 1 dataset
Motif DE_12h DE_12h-GCM2_MA0767.2 8 bp overlap
GTF2B 1 dataset
ChIP IMR-90_TERT GSE38303.GTF2B.IMR-90_TERT 163 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 267 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 473 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 210 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 144 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF5 1 dataset
Motif DE_12h DE_12h-IRF5_MA1420.1 14 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 368 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 460 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 358 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 449 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 412 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 506 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 484 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 2 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 134 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KDM5B 1 dataset
ChIP WA01 ENCSR000AUR.KDM5B.WA01 125 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 186 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MXD4 1 dataset
ChIP WTC11 ENCFF044PLT 265 bp overlap
Mecom 2 datasets
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
Motif ES_0h ES_0h-Mecom_MA0029.2 11 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 114 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 428 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 319 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 307 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 401 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 324 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
Nfatc2 2 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
POU5F1 5 datasets
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 455 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 214 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 119 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 229 bp overlap
PPARG 1 dataset
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF967OJF 245 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RELB 1 dataset
Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap
RORA 2 datasets
Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
RORB 1 dataset
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 372 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 287 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 430 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 404 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 519 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 344 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 279 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 256 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 260 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 271 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 5 datasets
ChIP HNSC GSE69479.SOX2.HNSC 336 bp overlap
ChIP hESC GSE69479.SOX2.hESC 271 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 300 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 312 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 321 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 206 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD4 3 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 268 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 196 bp overlap
TP53 2 datasets
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 392 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 272 bp overlap
TRERF1 1 dataset
ChIP WTC11 ENCFF113BUM 245 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 218 bp overlap
Vdr 2 datasets
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
Motif ES_0h ES_0h-Vdr_MA0693.4 7 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 155 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 304 bp overlap
ZFP69B 1 dataset
ChIP HEK293T GSE78099.ZFP69B.HEK293T 121 bp overlap
ZNF114 2 datasets
ChIP GM23338 ENCFF631OSW 357 bp overlap
ChIP GM23338 ENCSR555KFE.ZNF114.GM23338 334 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 345 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 301 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 221 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 573 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF75D 2 datasets
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Motif ES_0h ES_0h-ZNF75D_MA1601.2 12 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 257 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 230 bp overlap