chr4 : 82,799,242 82,799,535
293 bp 85 TFs 1 linked gene
This 293 bp open chromatin element is linked to SCD5 and is bound by 85 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SCD5 446 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:82,794,242 – 82,804,535
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
AR 2 datasets
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 243 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 247 bp overlap
ARID2 2 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 273 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 236 bp overlap
ARNTL 1 dataset
ChIP U2OS GSE44236.ARNTL.U2OS 167 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 178 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 293 bp overlap
BCL11B 2 datasets
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 250 bp overlap
ChIP thymus_CD34pos GSE84677.BCL11B.thymus_CD34pos 113 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 245 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 236 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 176 bp overlap
BRD4 9 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 273 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 262 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 238 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 74 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 77 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 98 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 135 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 149 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 293 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 219 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 248 bp overlap
CDK9 1 dataset
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 104 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 125 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 145 bp overlap
CTCF 8 datasets
ChIP dorsolateral prefrontal cortex ENCFF041CKA 72 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 70 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 121 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 68 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 83 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 80 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR353DFU.CTCF.esophagus_muscularis-mucosa 96 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 75 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 60 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 182 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 237 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 244 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 84 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 91 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 136 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 181 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 208 bp overlap
EZH2 9 datasets
ChIP H1 ENCFF232NZA 293 bp overlap
ChIP K-562 ENCSR000AQE.EZH2.K-562 174 bp overlap
ChIP K562 ENCFF494QJK 293 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 293 bp overlap
ChIP OCI-Ly7 GSE45982.EZH2.OCI-Ly7 231 bp overlap
ChIP ProEs GSE59087.EZH2.ProEs 253 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 238 bp overlap
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 293 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 293 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 282 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 197 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 216 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 122 bp overlap
JARID2 3 datasets
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 219 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 88 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 194 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 209 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 293 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 293 bp overlap
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 162 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 70 bp overlap
MAZ 1 dataset
ChIP MCF-7 ENCSR288IJC.MAZ.MCF-7 228 bp overlap
MED26 1 dataset
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 89 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 293 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 88 bp overlap
MTA2 2 datasets
ChIP RH4 GSE155861.MTA2.RH4 278 bp overlap
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 135 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 173 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 94 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 99 bp overlap
MYOD1 3 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 293 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 188 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 284 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 78 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 201 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 165 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 199 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 195 bp overlap
NFATC1 1 dataset
ChIP HUVEC-C_VEGF GSE49428.NFATC1.HUVEC-C_VEGF 106 bp overlap
NFYB 1 dataset
ChIP WTC11 ENCFF751ZTQ 116 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 187 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 99 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 100 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 293 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 212 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 261 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 293 bp overlap
POLR2A 1 dataset
ChIP GM19193 ENCFF599VTO 65 bp overlap
RAD21 2 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 83 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 232 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 183 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 159 bp overlap
RELA 2 datasets
ChIP GM12878 ENCSR664POU.RELA.GM12878 222 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 208 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 293 bp overlap
ChIP H1 ENCFF239FFS 244 bp overlap
RUNX1 2 datasets
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 65 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 197 bp overlap
SMARCA4 1 dataset
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 293 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 195 bp overlap
SP3 1 dataset
ChIP HEK293 ENCFF087XLA 90 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 139 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 220 bp overlap
SRF 4 datasets
ChIP GM12878 ENCFF878IIX 95 bp overlap
ChIP GM12878 ENCSR041XML.SRF.GM12878 74 bp overlap
ChIP Ishikawa ENCFF992QXM 53 bp overlap
ChIP MCF-7 ENCFF508RYE 50 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 143 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 82 bp overlap
SUZ12 3 datasets
ChIP H1 ENCFF881NFR 293 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 126 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 293 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 198 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 293 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 107 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 235 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 205 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 72 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 200 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 185 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 185 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 145 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 241 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 89 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 293 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 293 bp overlap