chr4 : 44,679,116 44,679,421
305 bp 82 TFs 2 linked genes
This 305 bp open chromatin element is linked to YIPF7 and GUF1 and is bound by 82 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
YIPF7 560 bp At TSS Proximity
GUF1 623 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:44,674,116 – 44,684,421
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 247 bp overlap
AR 1 dataset
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 80 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 78 bp overlap
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 298 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 131 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 231 bp overlap
BCL6 4 datasets
ChIP CD4 GSE59933.BCL6.CD4 198 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 305 bp overlap
ChIP OCI-Ly1 GSE107920.BCL6.OCI-Ly1 159 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 305 bp overlap
BRD3 2 datasets
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 154 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 192 bp overlap
BRD4 13 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 97 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 164 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 223 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 119 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 52 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 125 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 125 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 208 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 164 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 199 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 131 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 53 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 234 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 66 bp overlap
CHD1 6 datasets
ChIP A-549 ENCSR398YBM.CHD1.A-549 166 bp overlap
ChIP GM12878 ENCFF566UBH 222 bp overlap
ChIP H1 ENCFF998XEK 128 bp overlap
ChIP K-562 ENCSR000AQD.CHD1.K-562 116 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 305 bp overlap
ChIP WA01 ENCSR000EBU.CHD1.WA01 89 bp overlap
CREB1 1 dataset
ChIP KG-1_XX65023 GSE74928.CREB1.KG-1_XX65023 305 bp overlap
CTCF 8 datasets
ChIP HFFc6 ENCFF005CJI 199 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 277 bp overlap
ChIP endodermal cell ENCFF471YCZ 216 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 60 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 238 bp overlap
ChIP neural crest cell ENCFF182LWK 147 bp overlap
ChIP neural crest cell ENCFF182LWK 305 bp overlap
ChIP thyroid gland ENCFF163TUI 211 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF844FIP 128 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 123 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 86 bp overlap
ESRRA 3 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 305 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 188 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 305 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 203 bp overlap
FOXA1 1 dataset
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 226 bp overlap
HDAC1 2 datasets
ChIP HepG2 ENCFF750ZWM 133 bp overlap
ChIP NB4 GSE126720.HDAC1.NB4 244 bp overlap
HMGXB4 2 datasets
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 121 bp overlap
ChIP HepG2 ENCFF032DND 123 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE97411.INO80.Hep-G2 125 bp overlap
ChIP Huh-7 GSE97411.INO80.Huh-7 168 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 197 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 112 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 305 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 281 bp overlap
JUND 1 dataset
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 62 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 242 bp overlap
KDM1A 3 datasets
ChIP H1 ENCFF696SGD 108 bp overlap
ChIP HepG2 ENCFF240UWG 70 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 65 bp overlap
KMT2A 13 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 179 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 305 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 75 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 50 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 206 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 218 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 190 bp overlap
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 232 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 305 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 58 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 58 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 304 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 305 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 59 bp overlap
MAFK 1 dataset
ChIP IMR-90 ENCFF336DHZ 91 bp overlap
MCRS1 1 dataset
ChIP Huh-7 GSE97411.MCRS1.Huh-7 219 bp overlap
MED1 4 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 151 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 160 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 130 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 305 bp overlap
MED26 1 dataset
ChIP HCT-116 GSE121355.MED26.HCT-116 193 bp overlap
MEN1 2 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 305 bp overlap
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 123 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 181 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 305 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 117 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 129 bp overlap
MYC 2 datasets
ChIP MIA-PaCa-2_CM GSE143804.MYC.MIA-PaCa-2_CM 229 bp overlap
ChIP NB69 GSE138295.MYC.NB69 135 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 151 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 76 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 305 bp overlap
NFATC1 2 datasets
ChIP GM12878 ENCFF023CAZ 305 bp overlap
ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 241 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 50 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 305 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 305 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 305 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 64 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE126634.RAD21.HAP1 215 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 230 bp overlap
RBM39 2 datasets
ChIP HepG2 ENCFF084YZE 105 bp overlap
ChIP HepG2 ENCFF801JUH 103 bp overlap
REST 1 dataset
ChIP A549 ENCFF148AIS 82 bp overlap
SIN3A 3 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 121 bp overlap
ChIP K562 ENCFF984TCS 305 bp overlap
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 214 bp overlap
SMARCA4 7 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 69 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 197 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 130 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 305 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 211 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 305 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 244 bp overlap
SMARCB1 2 datasets
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 102 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 198 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 157 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 263 bp overlap
SPI1 6 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 199 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 281 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 305 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 140 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
STAT3 1 dataset
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 140 bp overlap
STAT5B 2 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 218 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 293 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 305 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 234 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 212 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 294 bp overlap
TCF7 1 dataset
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 159 bp overlap
UBTF 1 dataset
ChIP K562 ENCFF174SPM 93 bp overlap
YY1 2 datasets
ChIP ALL GSE145549.YY1.ALL 191 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 93 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 170 bp overlap
ZBTB42 1 dataset
ChIP HepG2 ENCFF153JWK 81 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 144 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 183 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 295 bp overlap
ZFX 3 datasets
ChIP HCT116 ENCFF324IZY 117 bp overlap
ChIP K562 ENCFF169LZT 89 bp overlap
ChIP K562 ENCFF536AJO 85 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 80 bp overlap
ZNF430 1 dataset
ChIP HepG2 ENCFF967HQR 70 bp overlap
ZNF546 1 dataset
ChIP HepG2 ENCFF996NZA 138 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 112 bp overlap