chr4 : 970,148 – 971,077
929 bp 117 TFs 1 linked gene
This 929 bp open chromatin element is linked to DGKQ and is bound by 117 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DGKQ 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:965,148 – 976,077
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
117 transcription factors
Source
Cell type
AGO2 3 datasets
ChIP HepG2 ENCFF252VFI 415 bp overlap
ChIP HepG2 ENCFF773YDL 415 bp overlap
ChIP HepG2 ENCFF773YDL 619 bp overlap
AR 2 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 116 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 118 bp overlap
ATF2 1 dataset
Motif DE_24h DE_24h-ATF2_MA1632.2 10 bp overlap
ATF4 1 dataset
Motif DE_24h DE_24h-ATF4_MA0833.3 10 bp overlap
Ahr::Arnt 3 datasets
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
BHLHE40 1 dataset
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 147 bp overlap
BRD4 4 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 146 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 224 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-744 196 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 203 bp overlap
CEBPB 1 dataset
ChIP HeLa-S3 ENCFF722WEG 265 bp overlap
CREB1 1 dataset
Motif DE_24h DE_24h-CREB1_MA0018.5 8 bp overlap
CREM 1 dataset
Motif DE_24h DE_24h-CREM_MA0609.3 10 bp overlap
CTCF 1 dataset
ChIP transverse colon ENCFF077CMZ 94 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 140 bp overlap
Creb5 1 dataset
Motif DE_24h DE_24h-Creb5_MA0840.2 10 bp overlap
DNMT3B 4 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 260 bp overlap
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 253 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 442 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 305 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 106 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 340 bp overlap
ERF::NHLH1 1 dataset
Motif DE_24h DE_24h-ERFNHLH1_MA1938.2 16 bp overlap
ESR1 7 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 161 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 297 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 317 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 105 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 250 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 245 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 191 bp overlap
FOS::JUN 1 dataset
Motif DE_24h DE_24h-FOSJUN_MA1126.2 10 bp overlap
FOSL1::JUND 1 dataset
Motif DE_24h DE_24h-FOSL1JUND_MA1143.2 9 bp overlap
GATA1 1 dataset
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 58 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 626 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 766 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 794 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 378 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 847 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 830 bp overlap
GLI3 1 dataset
Motif DE_24h DE_24h-GLI3_MA1491.3 15 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 467 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 288 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 464 bp overlap
HAND2 2 datasets
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 251 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 168 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 320 bp overlap
ISL2 1 dataset
Motif DE_24h DE_24h-ISL2_MA0914.2 6 bp overlap
JUN 5 datasets
Motif DE_24h DE_24h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 486 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 551 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 690 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 761 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 126 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 141 bp overlap
KLF1 3 datasets
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
ChIP HEK293 ENCFF159QSW 437 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 662 bp overlap
KLF10 1 dataset
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_24h DE_24h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_24h DE_24h-KLF12_MA0742.2 9 bp overlap
KLF13 1 dataset
Motif DE_24h DE_24h-KLF13_MA0657.2 17 bp overlap
KLF14 1 dataset
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF3 3 datasets
Motif DE_24h DE_24h-KLF3_MA1516.2 10 bp overlap
ChIP keratinocyte GSE140991.KLF3.keratinocyte 556 bp overlap
ChIP keratinocyte GSE140991.KLF3.keratinocyte 132 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 151 bp overlap
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 131 bp overlap
KLF5 1 dataset
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_24h DE_24h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap
KLF9 6 datasets
Motif DE_24h DE_24h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 134 bp overlap
ChIP HEK293 ENCFF588INF 451 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 320 bp overlap
ChIP MCF-7 ENCFF618FCM 557 bp overlap
ChIP MCF-7 ENCSR125ZYC.KLF9.MCF-7 318 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 399 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 195 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 278 bp overlap
MEIS1 2 datasets
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MITF 2 datasets
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 142 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 160 bp overlap
NEUROD1 1 dataset
Motif DE_24h DE_24h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 1 dataset
Motif DE_24h DE_24h-NEUROG2_MA1642.2 7 bp overlap
NFATC3 1 dataset
Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 152 bp overlap
NIPBL 2 datasets
ChIP GP5D GSE51234.NIPBL.GP5D 367 bp overlap
ChIP GP5D_SIRAD21 GSE51234.NIPBL.GP5D_SIRAD21 101 bp overlap
NR2C1 1 dataset
Motif DE_24h DE_24h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_24h DE_24h-NR2C2_MA1536.2 6 bp overlap
Neurod2 1 dataset
Motif DE_24h DE_24h-Neurod2_MA0668.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap
Nkx3-2 1 dataset
Motif DE_24h DE_24h-Nkx3-2_MA0122.4 10 bp overlap
Nr1H2 1 dataset
Motif DE_24h DE_24h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_24h DE_24h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_24h DE_24h-Nr1h3_MA2337.1 6 bp overlap
PAX5 1 dataset
Motif DE_24h DE_24h-PAX5_MA0014.4 8 bp overlap
POLR2A 3 datasets
ChIP GM12878 ENCFF521FXC 513 bp overlap
ChIP spleen ENCFF044PYR 186 bp overlap
ChIP spleen ENCFF446ZGT 521 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 233 bp overlap
ChIP K562 ENCFF648YPL 238 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 237 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 929 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 94 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 913 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Prdm4 1 dataset
Motif DE_24h DE_24h-Prdm4_MA1647.3 11 bp overlap
Ptf1A 1 dataset
Motif DE_24h DE_24h-Ptf1A_MA1618.2 9 bp overlap
RAD21 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 106 bp overlap
RBFOX2 4 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 336 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 336 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 91 bp overlap
ChIP K562 ENCFF196WTG 182 bp overlap
RBPJ 1 dataset
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 124 bp overlap
RELA 1 dataset
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 178 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 264 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 248 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 663 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 915 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 669 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 458 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 917 bp overlap
SMARCB1 2 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 169 bp overlap
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 158 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 500 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 94 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 572 bp overlap
ChIP HeLa-S3 ENCSR000EDM.SMARCC1.HeLa-S3 346 bp overlap
SOX10 1 dataset
Motif DE_24h DE_24h-SOX10_MA0442.3 6 bp overlap
SOX4 2 datasets
Motif DE_24h DE_24h-SOX4_MA0867.3 8 bp overlap
ChIP MDA-MB-231_TGFb GSE104760.SOX4.MDA-MB-231_TGFb 168 bp overlap
SP3 1 dataset
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP8 1 dataset
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_24h DE_24h-SP9_MA1564.2 10 bp overlap
SPI1 4 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 167 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 194 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 151 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 98 bp overlap
SREBF1 1 dataset
Motif DE_24h DE_24h-SREBF1_MA0595.1 10 bp overlap
SREBF2 2 datasets
Motif DE_24h DE_24h-SREBF2_MA0596.1 10 bp overlap
ChIP HeLa-S3 ENCSR611WZO.SREBF2.HeLa-S3 463 bp overlap
SREBP2 3 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 267 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 268 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 261 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 211 bp overlap
SUZ12 1 dataset
ChIP hiPSC GSE124903.SUZ12.hiPSC 270 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 348 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 358 bp overlap
TBX21 1 dataset
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 266 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 104 bp overlap
THRB 1 dataset
Motif DE_24h DE_24h-THRB_MA1576.2 18 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 157 bp overlap
TRIM24 1 dataset
ChIP LNCaP_ETOH GSE69331.TRIM24.LNCaP_ETOH 233 bp overlap
TWIST1 2 datasets
Motif DE_24h DE_24h-TWIST1_MA1123.3 8 bp overlap
Motif DE_24h DE_24h-TWIST1_MA1123.3 8 bp overlap
VEZF1 1 dataset
Motif DE_24h DE_24h-VEZF1_MA1578.2 6 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 105 bp overlap
Yy1 1 dataset
Motif DE_24h DE_24h-Yy1_MA0095.4 8 bp overlap
ZBTB24 1 dataset
Motif DE_24h DE_24h-ZBTB24_MA2330.1 10 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 84 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 216 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 152 bp overlap
ZNF214 1 dataset
Motif DE_24h DE_24h-ZNF214_MA1975.2 13 bp overlap
ZNF263 2 datasets
ChIP K-562 ENCSR000EWN.ZNF263.K-562 125 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 220 bp overlap
ZNF281 1 dataset
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ZNF582 1 dataset
Motif DE_24h DE_24h-ZNF582_MA1983.2 19 bp overlap
ZNF667 1 dataset
Motif DE_24h DE_24h-ZNF667_MA1984.2 11 bp overlap
ZNF701 1 dataset
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
ZNF85 1 dataset
Motif DE_24h DE_24h-ZNF85_MA1720.2 12 bp overlap
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