chr1 : 67,691,577 – 67,692,105
528 bp 99 TFs 1 linked gene
This 528 bp open chromatin element is linked to GADD45A and is bound by 99 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GADD45A 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:67,686,577 – 67,697,105
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP K562 ENCFF025NLP 245 bp overlap
AR 2 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 155 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 159 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 271 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 236 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 269 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 120 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 410 bp overlap
CTCF 2 datasets
ChIP foreskin keratinocyte ENCFF980OWR 411 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 209 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 402 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 251 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 288 bp overlap
ChIP K562 ENCFF574LOW 336 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 239 bp overlap
E2F8 1 dataset
ChIP K-562 ENCSR953DVM.E2F8.K-562 459 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 275 bp overlap
ChIP K562 ENCFF622HMZ 409 bp overlap
EGR1 2 datasets
ChIP K562 ENCFF895KGN 356 bp overlap
ChIP K562 ENCFF895KGN 142 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 325 bp overlap
ELF4 1 dataset
ChIP K-562 ENCSR638QHV.ELF4.K-562 344 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 268 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 192 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 325 bp overlap
ESR1 1 dataset
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 289 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 385 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 281 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 250 bp overlap
ETV1 2 datasets
ChIP K-562 ENCSR277DMR.ETV1.K-562 323 bp overlap
ChIP K562 ENCFF389WTI 161 bp overlap
ETV5 1 dataset
ChIP K562 ENCFF336FFA 418 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 528 bp overlap
ChIP DE DE-FOXA2-2 500 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 520 bp overlap
ChIP DE DE-GATA4-2 523 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 243 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 349 bp overlap
ChIP DE DE-GATA6-2 528 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 525 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 520 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 526 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 504 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 528 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 528 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 436 bp overlap
GATAD2A 1 dataset
ChIP K562 ENCFF071LJW 345 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 172 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF705LHX 307 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 233 bp overlap
ChIP K562 ENCFF386RRT 316 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 326 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 302 bp overlap
ChIP K562 ENCFF919OMP 401 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 298 bp overlap
HMG20A 2 datasets
ChIP K562 ENCFF840WDB 528 bp overlap
ChIP K562 ENCFF840WDB 347 bp overlap
HMGB2 1 dataset
ChIP IMR-90_proliferating GSE98245.HMGB2.IMR-90_proliferating 460 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 354 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 416 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 242 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 381 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 293 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 154 bp overlap
KDM1A 7 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 281 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 240 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 189 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 189 bp overlap
ChIP K562 ENCFF133OLU 461 bp overlap
ChIP K562 ENCFF133OLU 268 bp overlap
ChIP K562 ENCFF934ZRG 353 bp overlap
KDM5B 1 dataset
ChIP K-562 ENCSR000AQA.KDM5B.K-562 167 bp overlap
KHSRP 1 dataset
ChIP K562 ENCFF196BUB 358 bp overlap
MEF2D 2 datasets
ChIP K-562 ENCSR647ZXA.MEF2D.K-562 307 bp overlap
ChIP K562 ENCFF392LDT 409 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 481 bp overlap
ChIP K562 ENCFF320GSD 369 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR675LRO.MLLT1.K-562 234 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 192 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 196 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 296 bp overlap
NCOA1 1 dataset
ChIP K-562 ENCSR658WFQ.NCOA1.K-562 393 bp overlap
NCOR1 3 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 528 bp overlap
ChIP K562 ENCFF866HRM 385 bp overlap
ChIP K562 ENCFF866HRM 186 bp overlap
NFATC3 3 datasets
ChIP K-562 ENCSR051OUX.NFATC3.K-562 354 bp overlap
ChIP K562 ENCFF078EKB 431 bp overlap
ChIP K562 ENCFF078EKB 231 bp overlap
NFYA 1 dataset
ChIP K562 ENCFF732HOX 390 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 331 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 91 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 73 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 327 bp overlap
ChIP K562 ENCFF286KMN 417 bp overlap
PKNOX1 3 datasets
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 208 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 468 bp overlap
ChIP K562 ENCFF236IUS 377 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 178 bp overlap
POLR2A 3 datasets
ChIP K562 ENCFF215CWW 528 bp overlap
ChIP K562 ENCFF262YXJ 502 bp overlap
ChIP SK-N-SH ENCFF683PFH 390 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 287 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 172 bp overlap
RAD21 2 datasets
ChIP K-562 ENCSR000BKV.RAD21.K-562 91 bp overlap
ChIP K562 ENCFF634XYR 365 bp overlap
RBFOX2 6 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 167 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 240 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 216 bp overlap
ChIP K562 ENCFF196WTG 211 bp overlap
ChIP K562 ENCFF967GRF 211 bp overlap
ChIP K562 ENCFF967GRF 519 bp overlap
RBM22 2 datasets
ChIP K562 ENCFF420JDS 370 bp overlap
ChIP K562 ENCFF420JDS 50 bp overlap
RBM25 2 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 240 bp overlap
ChIP K562 ENCFF957ORK 296 bp overlap
RCOR1 2 datasets
ChIP K562 ENCFF216EEJ 297 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 276 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 312 bp overlap
REPIN1 1 dataset
ChIP HEK293 ENCSR146NLL.REPIN1.HEK293 311 bp overlap
SMAD5 2 datasets
ChIP K-562 ENCSR000FCD.SMAD5.K-562 382 bp overlap
ChIP K562 ENCFF941FJJ 506 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 194 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 436 bp overlap
ChIP K562 ENCFF506JCB 456 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 203 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 241 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 312 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 303 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 206 bp overlap
SP1 2 datasets
ChIP K562 ENCFF088XXV 104 bp overlap
ChIP K562 ENCFF088XXV 331 bp overlap
SP7 3 datasets
ChIP HEK293 ENCFF733RBE 278 bp overlap
ChIP HEK293 ENCFF733RBE 278 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 528 bp overlap
SUPT5H 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 428 bp overlap
ChIP K562 ENCFF902PAW 528 bp overlap
ChIP U2OS_THZ1 GSE115365.SUPT5H.U2OS_THZ1 233 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 126 bp overlap
TARDBP 1 dataset
ChIP K-562 ENCSR033VAZ.TARDBP.K-562 347 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 152 bp overlap
ChIP K562 ENCFF319QZT 381 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 63 bp overlap
YY1 3 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 144 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 139 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 240 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 164 bp overlap
ZBTB2 2 datasets
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 239 bp overlap
ChIP K562 ENCFF290ESQ 371 bp overlap
ZEB2 6 datasets
ChIP HEK293 ENCFF847JIE 526 bp overlap
ChIP HEK293 ENCFF847JIE 326 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 528 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 439 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 457 bp overlap
ChIP K562 ENCFF795CMH 388 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 281 bp overlap
ChIP K562 ENCFF361LXT 341 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 365 bp overlap
ZNF215 1 dataset
ChIP K-562 ENCSR699RWG.ZNF215.K-562 262 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 292 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 303 bp overlap
ZNF362 1 dataset
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 285 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 242 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 528 bp overlap
ZNF394 1 dataset
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 288 bp overlap
ZNF444 1 dataset
ChIP K-562 ENCSR164RIC.ZNF444.K-562 276 bp overlap
ZNF592 1 dataset
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 440 bp overlap
ZNF700 1 dataset
ChIP K-562 ENCSR959BQO.ZNF700.K-562 459 bp overlap
ZNF717 1 dataset
ChIP K562 ENCFF839EKA 243 bp overlap
ZSCAN21 2 datasets
ChIP HEK293 ENCFF582WUP 154 bp overlap
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 272 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 229 bp overlap
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