chrX : 139,211,514 – 139,211,955

441 bp 81 TFs 1 linked gene

This 441 bp open chromatin element is linked to FGF13 and is bound by 81 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
FGF13		6.5 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

81 transcription factors

ARID1B 1 dataset

ChIP K-562 ENCSR822CCM.ARID1B.K-562 225 bp overlap

ARNT 1 dataset

ChIP K-562 ENCSR613NUC.ARNT.K-562 90 bp overlap

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 441 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 308 bp overlap

BACH1 1 dataset

ChIP K-562 ENCSR740NPG.BACH1.K-562 210 bp overlap

BCOR 1 dataset

ChIP WA01 GSE104690.BCOR.WA01 294 bp overlap

BRD4 2 datasets

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 80 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 247 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 436 bp overlap

CREB3 2 datasets

ChIP K-562 ENCSR093FKD.CREB3.K-562 249 bp overlap

ChIP K562 ENCFF985QJI 191 bp overlap

CTBP1 1 dataset

ChIP K-562 ENCSR201NQZ.CTBP1.K-562 232 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 213 bp overlap

CXXC5 1 dataset

ChIP K562 ENCFF497CZN 304 bp overlap

DMBX1 1 dataset

ChIP K562 ENCFF972HXB 304 bp overlap

E4F1 1 dataset

ChIP K-562 ENCSR731LHZ.E4F1.K-562 147 bp overlap

EHMT2 1 dataset

ChIP K-562 ENCSR175EOM.EHMT2.K-562 227 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 178 bp overlap

ESR1 1 dataset

ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 355 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 374 bp overlap

ChIP DE DE-FOXA2-2 231 bp overlap

FOXK2 1 dataset

ChIP K-562 ENCSR508DQA.FOXK2.K-562 68 bp overlap

GABPA 3 datasets

ChIP K-562 ENCSR290MUH.GABPA.K-562 363 bp overlap

ChIP K562 ENCFF139LXS 248 bp overlap

ChIP K562 ENCFF139LXS 256 bp overlap

GABPB1 3 datasets

ChIP K-562 ENCSR138YYY.GABPB1.K-562 362 bp overlap

ChIP K562 ENCFF015GDS 171 bp overlap

ChIP K562 ENCFF015GDS 271 bp overlap

GATA2 1 dataset

ChIP K-562 ENCSR000DKA.GATA2.K-562 256 bp overlap

GMEB1 1 dataset

ChIP K562 ENCFF679VBB 125 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap

HBP1 1 dataset

ChIP K562 ENCFF882TEV 149 bp overlap

HDAC1 2 datasets

ChIP K-562 ENCSR387UWP.HDAC1.K-562 239 bp overlap

ChIP K-562 ENCSR711VWL.HDAC1.K-562 220 bp overlap

HDAC2 2 datasets

ChIP K-562 ENCSR893WSB.HDAC2.K-562 276 bp overlap

ChIP K-562 ENCSR075HTM.HDAC2.K-562 52 bp overlap

HDGF 1 dataset

ChIP K-562 ENCSR197ALX.HDGF.K-562 205 bp overlap

HMBOX1 2 datasets

ChIP K-562 ENCSR757IIU.HMBOX1.K-562 225 bp overlap

ChIP K562 ENCFF317JJX 323 bp overlap

IKZF1 1 dataset

ChIP K-562 ENCSR395HWC.IKZF1.K-562 277 bp overlap

IRF1 1 dataset

ChIP K-562 ENCSR854MCV.IRF1.K-562 114 bp overlap

KLF13 1 dataset

ChIP K-562 ENCSR608HVP.KLF13.K-562 126 bp overlap

L3MBTL2 2 datasets

ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 261 bp overlap

ChIP K562 ENCFF320EQC 373 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 441 bp overlap

MLLT1 2 datasets

ChIP K-562 ENCSR107GRP.MLLT1.K-562 159 bp overlap

ChIP K-562 ENCSR675LRO.MLLT1.K-562 151 bp overlap

MTA2 1 dataset

ChIP K-562 ENCSR411UYA.MTA2.K-562 262 bp overlap

MTA3 1 dataset

ChIP K-562 ENCSR180NCY.MTA3.K-562 124 bp overlap

MYOD1 3 datasets

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 238 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 190 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 187 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 240 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 185 bp overlap

NBN 1 dataset

ChIP K-562 ENCSR085QEV.NBN.K-562 201 bp overlap

NEUROG2 2 datasets

ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 244 bp overlap

ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 65 bp overlap

NFRKB 1 dataset

ChIP K562 ENCFF057YFW 97 bp overlap

NR2C1 3 datasets

ChIP K-562 ENCSR178DEG.NR2C1.K-562 352 bp overlap

ChIP K-562 ENCSR742IDN.NR2C1.K-562 234 bp overlap

ChIP K562 ENCFF568JLK 372 bp overlap

NR2C2 2 datasets

ChIP K-562 ENCSR750LYM.NR2C2.K-562 441 bp overlap

ChIP K562 ENCFF750AXF 380 bp overlap

NR4A1 2 datasets

ChIP K-562 ENCSR130PDE.NR4A1.K-562 256 bp overlap

ChIP K562 ENCFF998LHF 314 bp overlap

PKNOX1 1 dataset

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 354 bp overlap

POLR2A 1 dataset

ChIP K562 ENCFF215CWW 441 bp overlap

POU5F1 1 dataset

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 235 bp overlap

RAD21 1 dataset

ChIP RH4 GSE83726.RAD21.RH4 306 bp overlap

RBFOX2 2 datasets

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 181 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 181 bp overlap

SAP30 1 dataset

ChIP WA01 ENCSR000ATR.SAP30.WA01 170 bp overlap

SIN3A 2 datasets

ChIP WA01 ENCSR000EBO.SIN3A.WA01 148 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 367 bp overlap

SMAD4 2 datasets

ChIP K562 ENCFF628RBP 376 bp overlap

ChIP K562 ENCFF628RBP 166 bp overlap

SMARCA4 5 datasets

ChIP K-562 ENCSR587OQL.SMARCA4.K-562 379 bp overlap

ChIP K-562 ENCSR643VTW.SMARCA4.K-562 335 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 355 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 356 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 441 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 257 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 369 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 441 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 382 bp overlap

SOX21 1 dataset

ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 411 bp overlap

SOX6 1 dataset

ChIP K-562 ENCSR788RSW.SOX6.K-562 234 bp overlap

SPI1 3 datasets

ChIP K-562 GSE70482.SPI1.K-562 151 bp overlap

ChIP K-562 GSE70482.SPI1.K-562 111 bp overlap

ChIP K-562 ENCSR000BGW.SPI1.K-562 103 bp overlap

TAF1 2 datasets

ChIP H1 ENCFF478SZO 388 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 205 bp overlap

TBP 1 dataset

ChIP K-562 GSE55306.TBP.K-562 175 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 175 bp overlap

TEAD1 1 dataset

ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 229 bp overlap

TEAD4 1 dataset

ChIP H1 ENCFF778PAX 245 bp overlap

TFDP1 1 dataset

ChIP K-562 ENCSR017GBO.TFDP1.K-562 110 bp overlap

THRB 1 dataset

ChIP K562 ENCFF620NFN 143 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 202 bp overlap

VEZF1 1 dataset

ChIP K562 ENCFF053XDV 396 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 337 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 295 bp overlap

ZBTB2 1 dataset

ChIP K-562 ENCSR230PTV.ZBTB2.K-562 66 bp overlap

ZBTB26 1 dataset

ChIP K562 ENCFF766TDN 143 bp overlap

ZBTB40 2 datasets

ChIP K-562 ENCSR237VLT.ZBTB40.K-562 296 bp overlap

ChIP K562 ENCFF337GJB 396 bp overlap

ZKSCAN8 1 dataset

ChIP K562 ENCFF387ETI 439 bp overlap

ZNF175 3 datasets

ChIP K-562 ENCSR011PEI.ZNF175.K-562 264 bp overlap

ChIP K562 ENCFF497AEJ 441 bp overlap

ChIP K562 ENCFF497AEJ 188 bp overlap

ZNF239 1 dataset

ChIP K-562 ENCSR606KTL.ZNF239.K-562 222 bp overlap

ZNF24 4 datasets

ChIP K-562 ENCSR695EQB.ZNF24.K-562 223 bp overlap

ChIP K-562 ENCSR117WTM.ZNF24.K-562 146 bp overlap

ChIP K562 ENCFF497GLV 347 bp overlap

ChIP K562 ENCFF497GLV 127 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 281 bp overlap

ZNF518A 2 datasets

ChIP HEK293 ENCFF892ULS 418 bp overlap

ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 196 bp overlap

ZNF549 1 dataset

ChIP HEK293 GSE76494.ZNF549.HEK293 166 bp overlap

ZNF592 1 dataset

ChIP K-562 ENCSR249BHQ.ZNF592.K-562 441 bp overlap