chrX : 68,846,606 68,846,885
279 bp 91 TFs 0 linked genes
This 279 bp open chromatin element has no linked target genes and is bound by 91 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:68,841,606 – 68,851,885
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 242 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 279 bp overlap
ChIP H1 ENCFF399KAM 279 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 279 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 243 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 137 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 257 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 203 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 279 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 279 bp overlap
BRD4 5 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 158 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 217 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 265 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 279 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 196 bp overlap
CHD7 3 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 201 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 261 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 279 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 173 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 147 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 279 bp overlap
ChIP H1 ENCFF329MAX 279 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 279 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 279 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
EP300 4 datasets
ChIP H1 ENCFF927IYK 271 bp overlap
ChIP H1 ENCFF937OPV 205 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 244 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 195 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 148 bp overlap
ETV1 2 datasets
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 167 bp overlap
ChIP GIST-T1 GSE80443.ETV1.GIST-T1 109 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 279 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 279 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 185 bp overlap
ChIP WTC11 ENCFF338WGC 279 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 113 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 279 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 279 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 217 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 225 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 242 bp overlap
JUN 6 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 279 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 279 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 279 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 279 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 163 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 207 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 103 bp overlap
KDM1A 2 datasets
ChIP H1 ENCFF696SGD 279 bp overlap
ChIP H1 ENCFF696SGD 128 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 279 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 279 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYBL1 1 dataset
Motif DE_12h DE_12h-MYBL1_MA0776.1 12 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 279 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 188 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 140 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 279 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 263 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 233 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 238 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 269 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 198 bp overlap
ChIP hESC GSE20650.NANOG.hESC 268 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 134 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 279 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 180 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 199 bp overlap
PAX3 1 dataset
Motif ES_0h ES_0h-PAX3_MA1546.2 14 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 241 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 268 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 232 bp overlap
POU5F1 12 datasets
ChIP BG03 GSE21614.POU5F1.BG03 279 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 279 bp overlap
ChIP GM23338 ENCFF333SNB 243 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 279 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 279 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 279 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 147 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 177 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 279 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 279 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 261 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 279 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 279 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 218 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 279 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 279 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 279 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 279 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 279 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 240 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 204 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 207 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 279 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 279 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
REST 2 datasets
ChIP GM23338 ENCSR871KYB.REST.GM23338 88 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 109 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 96 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 230 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 137 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 279 bp overlap
SIN3A 6 datasets
ChIP H1 ENCFF042ZSL 279 bp overlap
ChIP H1 ENCFF896IJG 228 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 219 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 279 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 167 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 279 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 114 bp overlap
SMAD2 1 dataset
ChIP hESC GSE29422.SMAD2.hESC 200 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 279 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 279 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 101 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 279 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 279 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 173 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 279 bp overlap
SMAD3 6 datasets
ChIP BG03 GSE36578.SMAD3.BG03 103 bp overlap
ChIP BG03 GSE21614.SMAD3.BG03 162 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 279 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 245 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 172 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 241 bp overlap
SMAD4 1 dataset
ChIP hESC GSE29422.SMAD4.hESC 185 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 269 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 279 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 279 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 217 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 279 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 279 bp overlap
SMC1 2 datasets
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 222 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 276 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 90 bp overlap
SOX2 6 datasets
ChIP HNSC GSE69479.SOX2.HNSC 279 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 279 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 232 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 225 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 231 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 236 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 279 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 279 bp overlap
ChIP WTC11 ENCFF688PEU 279 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 146 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 201 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 233 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 122 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 244 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 272 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 232 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 190 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 279 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 279 bp overlap
TP53 2 datasets
ChIP SaOS-2 GSE15780.TP53.SaOS-2 153 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 265 bp overlap
TP63 2 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 111 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 163 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 203 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 142 bp overlap
VEZF1 1 dataset
Motif ES_0h ES_0h-VEZF1_MA1578.2 6 bp overlap
YY1 2 datasets
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 96 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 279 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 279 bp overlap
ZNF157 1 dataset
Motif ES_0h ES_0h-ZNF157_MA2331.1 21 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 279 bp overlap
ZNF281 1 dataset
ChIP WTC11 ENCFF551GAV 279 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 279 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 131 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 158 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 180 bp overlap
ZSCAN4 1 dataset
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap