chr21 : 36,697,371 36,697,825
454 bp 93 TFs 2 linked genes
This 454 bp open chromatin element is linked to SIM2 and ENSG00000224269 and is bound by 93 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SIM2 1.3 kb Proximal Proximity
ENSG00000224269 3.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:36,692,371 – 36,702,825
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
AGO1 3 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 130 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 113 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 140 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 454 bp overlap
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 415 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 444 bp overlap
BRD4 9 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 99 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 92 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 211 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 163 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 161 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 312 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 337 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 454 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 454 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 256 bp overlap
CBX4 2 datasets
ChIP hMSC GSE117084.CBX4.hMSC 162 bp overlap
ChIP hMSC GSE117084.CBX4.hMSC 101 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 93 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 117 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 454 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 153 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 454 bp overlap
ChIP H1 ENCFF329MAX 232 bp overlap
CTCF 7 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF764RHO 256 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 313 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 432 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 220 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 239 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 103 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 251 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 186 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 447 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 76 bp overlap
ELK1 1 dataset
ChIP WA01 ERP002417.ELK1.WA01 251 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000AUQ.EP300.WA01 125 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 259 bp overlap
ESRRA 1 dataset
ChIP WTC11 ENCFF591YCA 345 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 55 bp overlap
EZH2 22 datasets
ChIP GM23338 ENCFF613YON 454 bp overlap
ChIP H1 ENCFF232NZA 454 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 454 bp overlap
ChIP SK-N-MC ENCFF434OHW 156 bp overlap
ChIP SK-N-MC ENCFF674XUJ 156 bp overlap
ChIP SK-N-SH ENCFF657FZK 129 bp overlap
ChIP astrocyte ENCFF365JTP 454 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 363 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 401 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 454 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 454 bp overlap
ChIP fibroblast of lung ENCFF479BAW 128 bp overlap
ChIP hESC GSE113817.EZH2.hESC 109 bp overlap
ChIP hepatocyte ENCFF118DKH 262 bp overlap
ChIP hepatocyte ENCFF552DZB 454 bp overlap
ChIP keratinocyte ENCFF070STK 179 bp overlap
ChIP keratinocyte ENCFF070STK 309 bp overlap
ChIP neural cell ENCFF610EPB 179 bp overlap
ChIP neural cell ENCFF610EPB 106 bp overlap
ChIP neural progenitor cell ENCFF018MKA 454 bp overlap
ChIP neural progenitor cell ENCFF472NFV 454 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 139 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 68 bp overlap
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 204 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 195 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 314 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 161 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 313 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 217 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 409 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 454 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 212 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 401 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 454 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 97 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 454 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 454 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 375 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 339 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 76 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 194 bp overlap
ChIP WTC11 ENCFF223QFY 382 bp overlap
ChIP WTC11 ENCFF223QFY 145 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 203 bp overlap
MNX1 3 datasets
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 126 bp overlap
ChIP HepG2 ENCFF938KYA 328 bp overlap
ChIP HepG2 ENCFF938KYA 454 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 78 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 126 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 130 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 218 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 406 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 218 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 454 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 454 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 431 bp overlap
PCBP1 2 datasets
ChIP HepG2 ENCFF447SRJ 64 bp overlap
ChIP HepG2 ENCFF604TPT 64 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 454 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 186 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 54 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 386 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 204 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 454 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 309 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 454 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 170 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 216 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 88 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 362 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 454 bp overlap
REST 2 datasets
ChIP H1 ENCFF429RUE 191 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 127 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 454 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 246 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 321 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 207 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 172 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 454 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 454 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 74 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 119 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 247 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 209 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 198 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 158 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 81 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 289 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 159 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 301 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 183 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 87 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 454 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 454 bp overlap
SUZ12 9 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 86 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 393 bp overlap
ChIP H1 ENCFF507HGF 178 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 454 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 454 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 326 bp overlap
ChIP NT2/D1 ENCFF574SXS 454 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 454 bp overlap
TAF15 2 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 197 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 197 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 126 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 123 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 257 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 244 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 146 bp overlap
TCF4 1 dataset
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 178 bp overlap
TET2 1 dataset
ChIP Jurkat_RUNX1KD GSE85524.TET2.Jurkat_RUNX1KD 148 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 454 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 454 bp overlap
TRIM28 3 datasets
ChIP AF22 GSE84259.TRIM28.AF22 247 bp overlap
ChIP HCT-116 GSE72622.TRIM28.HCT-116 218 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 306 bp overlap
UBTF 1 dataset
ChIP hESC GSE76586.UBTF.hESC 164 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 324 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 53 bp overlap
ZNF701 1 dataset
ChIP HEK293 ENCFF041ZMJ 102 bp overlap