chr20 : 63,014,823 – 63,015,027
204 bp 101 TFs 1 linked gene
This 204 bp open chromatin element is linked to BHLHE23 and is bound by 101 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
BHLHE23 7.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:63,009,823 – 63,020,027
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
101 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 71 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 71 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 78 bp overlap
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 170 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 188 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 67 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 128 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 204 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 173 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF521IZR 204 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 204 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 124 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 181 bp overlap
BRD4 7 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 184 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 157 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 161 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 204 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 204 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 124 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 153 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 195 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 204 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 204 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 190 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 110 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 81 bp overlap
CTCF 1 dataset
ChIP hiPSC GSE115407.CTCF.hiPSC 129 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 204 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 124 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 108 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 204 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 57 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 159 bp overlap
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 172 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 201 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 76 bp overlap
EZH2 21 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 204 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 204 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 79 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 68 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 204 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 204 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 161 bp overlap
ChIP astrocyte ENCFF365JTP 204 bp overlap
ChIP astrocyte ENCFF365JTP 204 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 165 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 173 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 189 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 204 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 204 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 204 bp overlap
ChIP fibroblast of lung ENCFF479BAW 204 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 204 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 200 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 204 bp overlap
ChIP neural progenitor cell ENCFF018MKA 204 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 158 bp overlap
EZH2_phosphoT487 1 dataset
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 143 bp overlap
FIP1L1 1 dataset
ChIP Hep-G2 ENCSR313VZG.FIP1L1.Hep-G2 190 bp overlap
FOXA2 1 dataset
ChIP Caco-2 GSE66218.FOXA2.Caco-2 127 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 204 bp overlap
FOXP2 2 datasets
ChIP PFSK-1 ENCFF349WGE 128 bp overlap
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 204 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 79 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 158 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 194 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 55 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 172 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 165 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 94 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 166 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 204 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 204 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 204 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 58 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 204 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 135 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 197 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 204 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 203 bp overlap
KLF5 3 datasets
ChIP HEK293 GSE88976.KLF5.HEK293 204 bp overlap
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 150 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 204 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 54 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 204 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 204 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 154 bp overlap
ChIP WTC11 ENCFF223QFY 204 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 204 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 112 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 116 bp overlap
ChIP RH4 GSE155861.MTA2.RH4 204 bp overlap
MXI1 1 dataset
ChIP WA01 ENCSR000EBR.MXI1.WA01 166 bp overlap
MYB 2 datasets
ChIP MOLT-3 GSE59657.MYB.MOLT-3 204 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 159 bp overlap
MYC 3 datasets
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 132 bp overlap
ChIP NCI-H128 GSE41105.MYC.NCI-H128 204 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 204 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 204 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 204 bp overlap
MYOD1 3 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 204 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 204 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 177 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 204 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 77 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 204 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 204 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 91 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 204 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 204 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 204 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 163 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 131 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 174 bp overlap
NFYB 1 dataset
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 58 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 204 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 57 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 110 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 204 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 172 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF521FXC 174 bp overlap
ChIP GM23338 ENCFF450WCS 204 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 204 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 204 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 85 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 204 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 204 bp overlap
RNF2 2 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 76 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 176 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 204 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 204 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 204 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 203 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 135 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 204 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 204 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 204 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 82 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 191 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 204 bp overlap
SMARCA4 1 dataset
ChIP NSC GSE125033.SMARCA4.NSC 204 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 141 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 204 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 204 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 162 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 171 bp overlap
SOX8 1 dataset
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 174 bp overlap
SP1 2 datasets
ChIP HEK293 GSE76494.SP1.HEK293 204 bp overlap
ChIP WTC11 ENCFF688PEU 204 bp overlap
SP2 1 dataset
ChIP HEK293 GSE76494.SP2.HEK293 181 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 192 bp overlap
SREBP2 3 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 156 bp overlap
ChIP monocyte GSE129202.SREBP2.monocyte 163 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 186 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 146 bp overlap
SRSF3 1 dataset
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 84 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 163 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 204 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 165 bp overlap
TAF2 1 dataset
ChIP hESC GSE17917.TAF2.hESC 106 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 204 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 160 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 116 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 204 bp overlap
TCF3 2 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 204 bp overlap
ChIP NPC GSE154479.TCF3.NPC 146 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 55 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 79 bp overlap
TP53 4 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 204 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 195 bp overlap
ChIP WTC11 ENCFF359JCU 204 bp overlap
ChIP WTC11 ENCFF359JCU 155 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 156 bp overlap
YY1 4 datasets
ChIP GM12878 ENCFF908JTL 204 bp overlap
ChIP GM12878 ENCFF908JTL 122 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 181 bp overlap
ChIP NT2/D1 ENCFF999MII 184 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 159 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 130 bp overlap
ZNF143 1 dataset
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 145 bp overlap
ZNF263 2 datasets
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 190 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 175 bp overlap
ZNF687 1 dataset
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 180 bp overlap
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