chr20 : 33,475,400 33,476,091
691 bp 98 TFs 5 linked genes
This 691 bp open chromatin element is linked to 5 target genes and is bound by 98 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
CBFA2T2 14.3 kb Distal Multiome
SNTA1 32.0 kb Distal Multiome
CDK5RAP1 74.2 kb Distal Multiome
E2F1 210.6 kb Distal Multiome
ZNF341 256.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:33,470,400 – 33,481,091
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
ARRB1 1 dataset
ChIP prostate GSE55615.ARRB1.prostate 135 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 297 bp overlap
BRD4 5 datasets
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 570 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 250 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 422 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 486 bp overlap
CBFA2T2 2 datasets
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 225 bp overlap
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 225 bp overlap
CEBPA 4 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 195 bp overlap
ChIP HepG2 ENCFF175DFS 129 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 104 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 212 bp overlap
CEBPB 9 datasets
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 192 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 191 bp overlap
ChIP HepG2 ENCFF074JWB 201 bp overlap
ChIP HepG2 ENCFF536NTI 83 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 216 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 176 bp overlap
ChIP K562 ENCFF189VBN 271 bp overlap
ChIP K562 ENCFF584CTB 500 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 333 bp overlap
CEBPD 1 dataset
ChIP Hep-G2 ENCSR000BQJ.CEBPD.Hep-G2 263 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 301 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 348 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 288 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 312 bp overlap
ChIP BLaER1 ENCFF274GAT 279 bp overlap
ChIP BLaER1 ENCFF364PUR 215 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 51 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 137 bp overlap
EGR1 1 dataset
ChIP K-562 ENCSR000BNE.EGR1.K-562 120 bp overlap
ELF1 2 datasets
ChIP K562 ENCFF245JDF 96 bp overlap
ChIP K562 ENCFF886KFV 152 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 194 bp overlap
ERG 2 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 203 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 252 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 218 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 181 bp overlap
EZH2 7 datasets
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 169 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 325 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 72 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 182 bp overlap
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 423 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 124 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 271 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 311 bp overlap
ChIP DE DE-FOXA2-2 313 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 346 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 365 bp overlap
ChIP DE DE-GATA4-2 430 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 390 bp overlap
ChIP DE DE-GATA6-2 474 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 358 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 362 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 328 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 354 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 356 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 356 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 473 bp overlap
HCFC1 1 dataset
ChIP Hep-G2 ENCSR529JYA.HCFC1.Hep-G2 122 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF304IEJ 251 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 153 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 148 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF4A 1 dataset
ChIP hiPSC GSE104613.HNF4A.hiPSC 167 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 377 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 338 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 259 bp overlap
KDM1A 3 datasets
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 101 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 196 bp overlap
ChIP SU-DHL-4 GSE119038.KDM1A.SU-DHL-4 202 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 274 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 56 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 283 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 138 bp overlap
LCOR 1 dataset
ChIP K562 ENCFF340MHH 122 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 161 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 215 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 173 bp overlap
MAZ 2 datasets
ChIP HepG2 ENCFF068NYH 625 bp overlap
ChIP K562 ENCFF809XHP 64 bp overlap
MEF2B 2 datasets
ChIP KARPAS422 GSE69558.MEF2B.KARPAS422 375 bp overlap
ChIP KARPAS422 GSE69558.MEF2B.KARPAS422 93 bp overlap
MTA3 1 dataset
ChIP K562 ENCFF289UFB 51 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 241 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 281 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 559 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 162 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 187 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 391 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 457 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 105 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 104 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 249 bp overlap
PCBP1 4 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 219 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 203 bp overlap
ChIP HepG2 ENCFF447SRJ 431 bp overlap
ChIP HepG2 ENCFF604TPT 431 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 392 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 392 bp overlap
PKNOX1 3 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 112 bp overlap
ChIP K562 ENCFF236IUS 151 bp overlap
ChIP K562 ENCFF236IUS 81 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 305 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 314 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 226 bp overlap
RELA 4 datasets
ChIP 786-O GSE86092.RELA.786-O 293 bp overlap
ChIP BJAB GSE117250.RELA.BJAB 225 bp overlap
ChIP BJAB_4h-activation GSE117250.RELA.BJAB_4h-activation 182 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 135 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 137 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 497 bp overlap
SKI 1 dataset
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 232 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 136 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 490 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 475 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 327 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 403 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 289 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 366 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 442 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 337 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 563 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 638 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 325 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 355 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 149 bp overlap
SPI1 4 datasets
ChIP K-562 GSE70482.SPI1.K-562 53 bp overlap
ChIP K-562 GSE74999.SPI1.K-562 52 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 91 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 51 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 305 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 290 bp overlap
TAF15 2 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 194 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 170 bp overlap
TBX2 2 datasets
ChIP HepG2 ENCFF811TLA 333 bp overlap
ChIP HepG2 ENCFF811TLA 535 bp overlap
TCF3 2 datasets
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 102 bp overlap
ChIP NPC GSE154479.TCF3.NPC 235 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 87 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 307 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 72 bp overlap
TP53 1 dataset
ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 96 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 326 bp overlap
VEZF1 2 datasets
ChIP K562 ENCFF053XDV 396 bp overlap
ChIP K562 ENCFF053XDV 168 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 136 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 471 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF761 1 dataset
ChIP HepG2 ENCFF761IOF 277 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 441 bp overlap