chr18 : 65,256,798 – 65,257,698
900 bp 125 TFs 0 linked genes
This 900 bp open chromatin element has no linked target genes and is bound by 125 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:65,251,798 – 65,262,698
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 273 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 485 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 211 bp overlap
Alx4 2 datasets
Motif DE_12h DE_12h-Alx4_MA0853.2 12 bp overlap
Motif ES_0h ES_0h-Alx4_MA0853.2 12 bp overlap
Arx 2 datasets
Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap
Motif ES_0h ES_0h-Arx_MA0874.2 10 bp overlap
BARX1 3 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BARX2 1 dataset
Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 112 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 292 bp overlap
BSX 3 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 245 bp overlap
CTCF 2 datasets
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 341 bp overlap
Crx 1 dataset
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
DLX1 3 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 3 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
DPF2 3 datasets
ChIP BIN-67 GSE117734.DPF2.BIN-67 214 bp overlap
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 207 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 170 bp overlap
Dlx2 2 datasets
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Motif ES_0h ES_0h-Dlx2_MA0885.3 8 bp overlap
Dlx3 3 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 3 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Dlx5 2 datasets
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
Motif ES_0h ES_0h-Dlx5_MA1476.3 8 bp overlap
Dmbx1 1 dataset
Motif ES_0h ES_0h-Dmbx1_MA0883.2 10 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 173 bp overlap
ELK1 2 datasets
Motif DE_12h DE_12h-ELK1_MA0028.3 9 bp overlap
Motif ES_0h ES_0h-ELK1_MA0028.3 9 bp overlap
ELK1::HOXA1 2 datasets
Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap
Motif ES_0h ES_0h-ELK1HOXA1_MA1931.1 14 bp overlap
ELK3 2 datasets
Motif DE_12h DE_12h-ELK3_MA0759.3 9 bp overlap
Motif ES_0h ES_0h-ELK3_MA0759.3 9 bp overlap
EN2 2 datasets
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
Motif ES_0h ES_0h-EN2_MA0642.3 7 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap
ERF::FOXI1 2 datasets
Motif ES_0h ES_0h-ERFFOXI1_MA1935.2 10 bp overlap
Motif ES_0h ES_0h-ERFFOXI1_MA1935.2 10 bp overlap
ETV1 1 dataset
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 1 dataset
Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXI1 1 dataset
Motif ES_0h ES_0h-ETV5FOXI1_MA1946.2 12 bp overlap
EWSR1-FLI1 1 dataset
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
FLI1::FOXI1 2 datasets
Motif ES_0h ES_0h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif ES_0h ES_0h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA1 1 dataset
Motif ES_0h ES_0h-FOXA1_MA0148.5 8 bp overlap
FOXA2 1 dataset
Motif ES_0h ES_0h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif ES_0h ES_0h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif ES_0h ES_0h-FOXC1_MA0032.2 11 bp overlap
FOXI1 1 dataset
Motif ES_0h ES_0h-FOXI1_MA0042.2 7 bp overlap
FOXP1 1 dataset
Motif ES_0h ES_0h-FOXP1_MA0481.4 7 bp overlap
FOXP4 1 dataset
Motif ES_0h ES_0h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
Foxl2 2 datasets
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
GATA1::TAL1 1 dataset
Motif ES_0h ES_0h-GATA1TAL1_MA0140.3 17 bp overlap
GBX1 2 datasets
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
Motif ES_0h ES_0h-GBX1_MA0889.2 7 bp overlap
GBX2 3 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
GSC 1 dataset
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
HESX1 3 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HIC2 1 dataset
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HOXA7 3 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif ES_0h ES_0h-HOXB2ELK1_MA1957.1 14 bp overlap
HSF2 1 dataset
Motif ES_0h ES_0h-HSF2_MA0770.1 13 bp overlap
Hoxa13 1 dataset
Motif ES_0h ES_0h-Hoxa13_MA0650.4 8 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 134 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 214 bp overlap
LBX1 2 datasets
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
Motif ES_0h ES_0h-LBX1_MA0618.2 7 bp overlap
LBX2 3 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 3 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
LHX9 2 datasets
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
Motif ES_0h ES_0h-LHX9_MA0701.3 7 bp overlap
Lef1 2 datasets
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
Lhx3 1 dataset
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
MSX1 3 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 3 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
MYB 1 dataset
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 127 bp overlap
Msx3 3 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 304 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 672 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 475 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 285 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 836 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 551 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 486 bp overlap
ChIP hESC GSE20650.NANOG.hESC 264 bp overlap
ChIP hESC GSE18292.NANOG.hESC 122 bp overlap
NIPBL 2 datasets
ChIP WA09 GSE105028.NIPBL.WA09 291 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 197 bp overlap
NKX2-2 4 datasets
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-2_MA1645.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-2_MA1645.2 8 bp overlap
NR3C1 1 dataset
ChIP T-47D_R5020 GSE126859.NR3C1.T-47D_R5020 346 bp overlap
Nobox 3 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
OTX1 1 dataset
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
PITX1 1 dataset
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif ES_0h ES_0h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF833NJP 411 bp overlap
POU2F1::SOX2 1 dataset
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 3 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU5F1 11 datasets
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 552 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 314 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 718 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 178 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 322 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 170 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 526 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 497 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 211 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
PRDM14 5 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 292 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 692 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 530 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 774 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 60 bp overlap
PRDM15 3 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 239 bp overlap
ChIP HepG2 ENCFF259LUZ 485 bp overlap
ChIP WTC11 ENCFF108TMF 262 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
PRRX2 2 datasets
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Motif ES_0h ES_0h-PRRX2_MA0075.4 7 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm15 4 datasets
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
Motif ES_0h ES_0h-Prdm15_MA1616.2 11 bp overlap
Motif ES_0h ES_0h-Prdm15_MA1616.2 11 bp overlap
RAD21 6 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 456 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 445 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 562 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 306 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 160 bp overlap
RAX 3 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RHOXF1 1 dataset
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 375 bp overlap
Rhox11 1 dataset
Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 284 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 221 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 410 bp overlap
SMC1 1 dataset
ChIP HAP1 GSE94992.SMC1.HAP1 217 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 209 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 342 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 383 bp overlap
SOX21 1 dataset
Motif ES_0h ES_0h-SOX21_MA0866.1 15 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 183 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 240 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 329 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 138 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Spi1 1 dataset
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 118 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 149 bp overlap
TCF7 2 datasets
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
Motif ES_0h ES_0h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 3 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif ES_0h ES_0h-TCF7L2_MA0523.2 9 bp overlap
Motif ES_0h ES_0h-TCF7L2_MA0523.2 9 bp overlap
TEAD1 1 dataset
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
TFCP2 1 dataset
Motif ES_0h ES_0h-TFCP2_MA1968.2 9 bp overlap
VENTX 2 datasets
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Motif ES_0h ES_0h-VENTX_MA0724.1 9 bp overlap
Vdr 2 datasets
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
Motif ES_0h ES_0h-Vdr_MA0693.4 7 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 188 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF449 2 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF652 1 dataset
Motif ES_0h ES_0h-ZNF652_MA1657.2 9 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF75D 1 dataset
Motif ES_0h ES_0h-ZNF75D_MA1601.2 12 bp overlap
ZNF85 2 datasets
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
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