chr18 : 28,063,321 28,063,774
453 bp 99 TFs 0 linked genes
This 453 bp open chromatin element has no linked target genes and is bound by 99 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:28,058,321 – 28,068,774
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
ARID1A 3 datasets
ChIP 12Z GSE129781.ARID1A.12Z 112 bp overlap
ChIP HAP1 GSE108387.ARID1A.HAP1 354 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 141 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 384 bp overlap
BRD4 3 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 453 bp overlap
ChIP HCC1395_JQ1 GSE63581.BRD4.HCC1395_JQ1 138 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 123 bp overlap
CDK8 1 dataset
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 94 bp overlap
CDX2 1 dataset
ChIP COLO-320 GSE30026.CDX2.COLO-320 102 bp overlap
CDX4 1 dataset
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 159 bp overlap
CHD7 4 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 132 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 163 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 446 bp overlap
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 179 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 184 bp overlap
ELF1 1 dataset
ChIP SK-N-SH ENCSR000BTA.ELF1.SK-N-SH 117 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 333 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 306 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 410 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 384 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 293 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 142 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 240 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 403 bp overlap
FLI1 6 datasets
ChIP A-673 GSE99959.FLI1.A-673 205 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 299 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 287 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 271 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 310 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 261 bp overlap
FOS 3 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 155 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 186 bp overlap
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 90 bp overlap
FOSL2 3 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 60 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 155 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 86 bp overlap
FOXA1 5 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 283 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 202 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 242 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 370 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 282 bp overlap
FOXA2 7 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 167 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 137 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 202 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 247 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 135 bp overlap
ChIP DE DE-FOXA2-1 420 bp overlap
ChIP DE DE-FOXA2-2 356 bp overlap
FOXL2 5 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 83 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 84 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 155 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 172 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 259 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 272 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 453 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 389 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 212 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 453 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXA4 1 dataset
Motif DE_12h DE_12h-HOXA4_MA1496.2 7 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 156 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 382 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 396 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 442 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 277 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 312 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 453 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 162 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 122 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 172 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF6 2 datasets
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
ChIP PDAC GSE64557.KLF6.PDAC 453 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 221 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 153 bp overlap
MED1 5 datasets
ChIP hMSC-TERT4_D0 GSE104537.MED1.hMSC-TERT4_D0 144 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 155 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 136 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 142 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 252 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 226 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 453 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 422 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 254 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 453 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 367 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 453 bp overlap
ChIP hESC GSE18292.NANOG.hESC 156 bp overlap
NKX6-1 1 dataset
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 1 dataset
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 158 bp overlap
PGR_B 1 dataset
ChIP hESC GSE62475.PGR_B.hESC 148 bp overlap
POLR2A 1 dataset
ChIP IMR-90 ENCFF672YWV 441 bp overlap
POU3F1 1 dataset
ChIP SKM-1_D2 GSE93706.POU3F1.SKM-1_D2 185 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 194 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 376 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 406 bp overlap
PRDM6 4 datasets
ChIP HEK293 ENCFF283AJL 328 bp overlap
ChIP HEK293 ENCFF283AJL 328 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 453 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 285 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 170 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 233 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 356 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 230 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 281 bp overlap
RELA 5 datasets
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 142 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 151 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 125 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 93 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 203 bp overlap
SATB1 1 dataset
Motif DE_12h DE_12h-SATB1_MA1963.2 7 bp overlap
SIN3A 1 dataset
ChIP PFSK-1 ENCFF218MAY 291 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 370 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 311 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 403 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 392 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 453 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 407 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA2 6 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 297 bp overlap
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 84 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 453 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 453 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 453 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 453 bp overlap
SMARCA4 7 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 453 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 453 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 217 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 367 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 304 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 453 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 342 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 252 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 390 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap
SOX13 2 datasets
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
Motif DE_36h DE_36h-SOX13_MA1120.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 361 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 371 bp overlap
SOX2 5 datasets
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
Motif DE_36h DE_36h-SOX2_MA0143.5 7 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 432 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 230 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 196 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SPI1 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 113 bp overlap
SREBF2 2 datasets
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Motif DE_36h DE_36h-SREBF2_MA0596.1 10 bp overlap
Sox3 2 datasets
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
Motif DE_36h DE_36h-Sox3_MA0514.3 7 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 381 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 370 bp overlap
TAL1 2 datasets
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 93 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 144 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 166 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF582MWI 453 bp overlap
ChIP HEK293 ENCFF582MWI 306 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 313 bp overlap
YY1 2 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 274 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 140 bp overlap
ZFP42 2 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif DE_36h DE_36h-ZFP42_MA1651.2 13 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 208 bp overlap
ZNF558 2 datasets
ChIP HEK293 ENCSR447ZTA.ZNF558.HEK293 180 bp overlap
ChIP HEK293T GSE78099.ZNF558.HEK293T 84 bp overlap
ZNF768 2 datasets
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap