chr18 : 8,717,390 8,717,753
363 bp 78 TFs 2 linked genes
This 363 bp open chromatin element is linked to MTCL1 and GACAT2 and is bound by 78 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
MTCL1 20 bp At TSS Proximity
GACAT2 9.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:8,712,390 – 8,722,753
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 129 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 234 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 363 bp overlap
ATF2 6 datasets
ChIP GM12878 ENCFF066HPG 133 bp overlap
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 108 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 104 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 131 bp overlap
ChIP K562 ENCFF139ZZG 94 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 363 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 317 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 161 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 296 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 282 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 318 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 146 bp overlap
BRD4 3 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 182 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 63 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 201 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 168 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 145 bp overlap
CREB1 4 datasets
ChIP GM23338 ENCFF432ZEW 103 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 318 bp overlap
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 341 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 363 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 363 bp overlap
CTCF 18 datasets
ChIP GM23338 ENCFF772DML 178 bp overlap
ChIP H1 ENCFF230QSV 153 bp overlap
ChIP H1 ENCFF414GZI 172 bp overlap
ChIP H1 ENCFF764RHO 208 bp overlap
ChIP H9 ENCFF152GTF 181 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 167 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 199 bp overlap
ChIP endodermal cell ENCFF471YCZ 294 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 180 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 158 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 149 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 188 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 156 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 154 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 120 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 195 bp overlap
ChIP neural progenitor cell ENCFF420RBO 283 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 207 bp overlap
CTNNB1 1 dataset
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 109 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 249 bp overlap
ChIP BLaER1 ENCFF364PUR 273 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 216 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 363 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 142 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 160 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 242 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 281 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 309 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 343 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 341 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 307 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 363 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 310 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 363 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 208 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 196 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 363 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 242 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 363 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 167 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 363 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 363 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 363 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 363 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 363 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 363 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 229 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 221 bp overlap
KLF4 1 dataset
ChIP hiPSC GSE56567.KLF4.hiPSC 147 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 243 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 318 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 363 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 129 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 212 bp overlap
NANOG 8 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 363 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 361 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 183 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 262 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 322 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 188 bp overlap
ChIP hESC GSE20650.NANOG.hESC 154 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 217 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 311 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 207 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 208 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 197 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 186 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 328 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 363 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 363 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 254 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 287 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 146 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 363 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 113 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 175 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 230 bp overlap
ChIP H1 ENCFF967OJF 187 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 155 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 156 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 363 bp overlap
REST 3 datasets
ChIP H1 ENCFF429RUE 91 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 172 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 162 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 288 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 178 bp overlap
SIN3A 3 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 296 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 111 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 318 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 110 bp overlap
SMAD2 1 dataset
ChIP hESC GSE29422.SMAD2.hESC 120 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 363 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 363 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 363 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 363 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 363 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 353 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 363 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 303 bp overlap
SMAD3 5 datasets
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
ChIP BG03 GSE21614.SMAD3.BG03 220 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 301 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 350 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 299 bp overlap
SMAD4 1 dataset
ChIP hESC GSE29422.SMAD4.hESC 145 bp overlap
SMARCA4 3 datasets
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 208 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 363 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 294 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 340 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 194 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 272 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 205 bp overlap
SP1 4 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 226 bp overlap
ChIP WTC11 ENCFF688PEU 363 bp overlap
ChIP WTC11 ENCFF688PEU 254 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 171 bp overlap
SRF 1 dataset
ChIP H1 ENCFF036PEF 223 bp overlap
SUZ12 1 dataset
ChIP WA01 ENCSR000ATS.SUZ12.WA01 333 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 270 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 361 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 337 bp overlap
TP53 2 datasets
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 325 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 273 bp overlap
USF1 1 dataset
ChIP H1 ENCFF090WVU 241 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 299 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 225 bp overlap
ZFHX2 2 datasets
ChIP HEK293 ENCFF167TUA 363 bp overlap
ChIP HEK293 ENCFF167TUA 208 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 258 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 334 bp overlap
ZNF281 1 dataset
ChIP WTC11 ENCFF551GAV 331 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 274 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 224 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 149 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 72 bp overlap