chr15 : 54,148,493 54,149,205
712 bp 98 TFs 0 linked genes
This 712 bp open chromatin element has no linked target genes and is bound by 98 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:54,143,493 – 54,154,205
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
ATF4 1 dataset
Motif DE_36h DE_36h-ATF4_MA0833.3 10 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 174 bp overlap
BRD2 5 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 153 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 104 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 282 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 281 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 285 bp overlap
BRD3 1 dataset
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 452 bp overlap
BRD4 8 datasets
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 106 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 155 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 586 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 703 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 605 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 445 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 282 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD4.THP-1_iBET-BD2-PMA 237 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 280 bp overlap
CEBPB 1 dataset
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 206 bp overlap
CEBPG 1 dataset
Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 328 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
DPF2 3 datasets
ChIP GM12878 ENCFF681AJV 452 bp overlap
ChIP GM12878 ENCFF681AJV 235 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 248 bp overlap
DUX4 2 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Dmbx1 1 dataset
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
Dux 1 dataset
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCFF692SMY 177 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 310 bp overlap
ChIP hESC GSE26097.EOMES.hESC 194 bp overlap
FEZF2 1 dataset
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 400 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 281 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 521 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 616 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 576 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 665 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 636 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 576 bp overlap
GLIS2 1 dataset
Motif DE_36h DE_36h-GLIS2_MA0736.1 14 bp overlap
GLIS3 1 dataset
Motif DE_36h DE_36h-GLIS3_MA0737.1 14 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 159 bp overlap
ChIP GM12878 ENCFF824TGK 165 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 342 bp overlap
ChIP GM12878 ENCFF918AID 239 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 181 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 166 bp overlap
INSM1 1 dataset
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
ISL2 1 dataset
Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 153 bp overlap
JUN 1 dataset
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
KMT2A 2 datasets
ChIP MV4-11 GSE79899.KMT2A.MV4-11 220 bp overlap
ChIP OCI-AML-3_VTP GSE129636.KMT2A.OCI-AML-3_VTP 100 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 87 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 245 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 375 bp overlap
MXI1 1 dataset
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
MZF1 1 dataset
Motif DE_36h DE_36h-MZF1_MA0056.3 8 bp overlap
Mecom 2 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
NCOA2 1 dataset
ChIP THP-1_Dex GSE99887.NCOA2.THP-1_Dex 186 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 245 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 330 bp overlap
NFIA 1 dataset
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
NFYA 1 dataset
Motif DE_36h DE_36h-NFYA_MA0060.4 8 bp overlap
NFYC 1 dataset
Motif DE_36h DE_36h-NFYC_MA1644.2 7 bp overlap
NR2F1 2 datasets
Motif DE_36h DE_36h-NR2F1_MA0017.3 12 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 106 bp overlap
NR3C1 3 datasets
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 76 bp overlap
ChIP THP-1_Dex GSE99887.NR3C1.THP-1_Dex 276 bp overlap
ChIP THP-1_Dex GSE99887.NR3C1.THP-1_Dex 271 bp overlap
NR4A1 2 datasets
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 127 bp overlap
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 422 bp overlap
Nkx3-1 1 dataset
Motif DE_36h DE_36h-Nkx3-1_MA0124.3 7 bp overlap
Nkx3-2 1 dataset
Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
POU2F1 1 dataset
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
POU3F4 1 dataset
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
PPARG 1 dataset
Motif DE_36h DE_36h-PPARG_MA0066.2 19 bp overlap
Pgr 1 dataset
Motif DE_36h DE_36h-Pgr_MA2323.1 17 bp overlap
Prdm5 1 dataset
Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 204 bp overlap
RARA 1 dataset
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
RELA 1 dataset
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.RELA.THP-1_eGFP-Pam3csk-4h 84 bp overlap
RELB 3 datasets
Motif DE_36h DE_36h-RELB_MA1117.2 7 bp overlap
ChIP GM12878 ENCFF217ADF 295 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 387 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
Rarb 1 dataset
Motif DE_36h DE_36h-Rarb_MA0857.1 16 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 156 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 131 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 113 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 458 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 245 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 304 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 337 bp overlap
SMAD3 2 datasets
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 113 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 67 bp overlap
SMARCA5 2 datasets
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 188 bp overlap
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 158 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
SPI1 3 datasets
ChIP EM-3 GSE128834.SPI1.EM-3 100 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 68 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 153 bp overlap
SPIC 1 dataset
Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 151 bp overlap
TBP 1 dataset
Motif DE_36h DE_36h-TBP_MA0108.3 7 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 135 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCFF433DMU 63 bp overlap
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 209 bp overlap
TFAP2E 1 dataset
Motif DE_36h DE_36h-TFAP2E_MA1569.2 9 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 213 bp overlap
VEZF1 1 dataset
Motif DE_36h DE_36h-VEZF1_MA1578.2 6 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZNF274 1 dataset
Motif DE_36h DE_36h-ZNF274_MA1592.2 12 bp overlap
ZNF331 1 dataset
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
ZNF341 1 dataset
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
ZNF528 1 dataset
Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
ZNF701 1 dataset
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
ZNF816 1 dataset
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap
ZSCAN31 1 dataset
Motif DE_36h DE_36h-ZSCAN31_MA1722.2 18 bp overlap
Zfx 1 dataset
Motif DE_36h DE_36h-Zfx_MA0146.3 10 bp overlap