chr13 : 91,355,942 91,356,646
704 bp 91 TFs 2 linked genes
This 704 bp open chromatin element is linked to MIR92A1 and MIR17HG and is bound by 91 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MIR92A1 4.6 kb Proximal Proximity
MIR17HG 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:91,350,942 – 91,361,646
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
AGO2 4 datasets
ChIP HepG2 ENCFF252VFI 513 bp overlap
ChIP HepG2 ENCFF252VFI 256 bp overlap
ChIP HepG2 ENCFF773YDL 513 bp overlap
ChIP HepG2 ENCFF773YDL 258 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 249 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 272 bp overlap
ASXL1 1 dataset
ChIP HEK293T GSE51673.ASXL1.HEK293T 115 bp overlap
ATF2 3 datasets
ChIP GM12878 ENCFF521LQJ 202 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 131 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 428 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 148 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 552 bp overlap
BRD3 1 dataset
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 372 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 289 bp overlap
CEBPB 2 datasets
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 158 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 152 bp overlap
CEBPD 2 datasets
ChIP K-562 ENCSR000BVY.CEBPD.K-562 100 bp overlap
ChIP K-562 ENCSR000BVY.CEBPD.K-562 139 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 331 bp overlap
CREB1 1 dataset
ChIP K-562 ENCSR000BSO.CREB1.K-562 350 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCFF003PDY 331 bp overlap
ELF4 3 datasets
ChIP HEK293T ENCFF509MGU 354 bp overlap
ChIP HEK293T ENCSR778QLY.ELF4.HEK293T 67 bp overlap
ChIP HEK293T ENCSR778QLY.ELF4.HEK293T 242 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 398 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 123 bp overlap
ESRRB 1 dataset
ChIP K-562 ENCSR264LYE.ESRRB.K-562 218 bp overlap
ESRRG 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 75 bp overlap
ETS1 2 datasets
ChIP HEY-A8 GSE101832.ETS1.HEY-A8 416 bp overlap
ChIP OVCAR-8 GSE101832.ETS1.OVCAR-8 168 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 303 bp overlap
FOXK2 1 dataset
ChIP HEK293T ENCFF745GCJ 365 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 130 bp overlap
FUS 3 datasets
ChIP K-562 GSE120104.FUS.K-562 416 bp overlap
ChIP K-562 ENCSR051DXE.FUS.K-562 300 bp overlap
ChIP K-562 GSE120104.FUS.K-562 118 bp overlap
HMGXB4 2 datasets
ChIP K562 ENCFF620JLK 177 bp overlap
ChIP K562 ENCFF620JLK 405 bp overlap
HNRNPK 1 dataset
ChIP primary-keratinocyte GSE122327.HNRNPK.primary-keratinocyte 94 bp overlap
HOXA7 1 dataset
ChIP A-549 ENCSR402OYZ.HOXA7.A-549 520 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 215 bp overlap
IFNA1 1 dataset
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 704 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 94 bp overlap
MAFF 1 dataset
ChIP K-562 ENCSR000EGI.MAFF.K-562 170 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 258 bp overlap
MBD4 2 datasets
ChIP Hep-G2 ENCSR000BQW.MBD4.Hep-G2 119 bp overlap
ChIP Hep-G2 ENCSR000BQW.MBD4.Hep-G2 533 bp overlap
MEF2D 1 dataset
ChIP SK-UT-1 GSE132622.MEF2D.SK-UT-1 81 bp overlap
MTA3 3 datasets
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 105 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 134 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 266 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 298 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR910JAI.NCOR1.K-562 247 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 660 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 704 bp overlap
NFATC1 2 datasets
ChIP GM12878 ENCFF023CAZ 577 bp overlap
ChIP GM12878 ENCFF023CAZ 380 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 271 bp overlap
NFRKB 2 datasets
ChIP HEK293T ENCFF538OWZ 371 bp overlap
ChIP HEK293T ENCSR997GPO.NFRKB.HEK293T 262 bp overlap
NONO 1 dataset
ChIP K-562 GSE120104.NONO.K-562 204 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 354 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 414 bp overlap
ChIP BEAS-2B_shNR3C1_Veh_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_Veh_IA1 382 bp overlap
ChIP K-562 ENCSR494UQJ.NR3C1.K-562 119 bp overlap
NRF1 1 dataset
ChIP H1 ENCFF582PEJ 245 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 391 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 311 bp overlap
PML 2 datasets
ChIP GM12878 ENCSR000BQM.PML.GM12878 332 bp overlap
ChIP GM12878 ENCSR000BQM.PML.GM12878 228 bp overlap
POLR2A 39 datasets
ChIP GM10847 ENCFF241PBX 391 bp overlap
ChIP GM10847 ENCFF241PBX 335 bp overlap
ChIP GM12878 ENCFF412KAE 302 bp overlap
ChIP GM12878 ENCFF412KAE 367 bp overlap
ChIP GM12891 ENCFF012SUT 281 bp overlap
ChIP GM12891 ENCFF127ICP 125 bp overlap
ChIP GM12891 ENCFF379FCI 161 bp overlap
ChIP GM12892 ENCFF245LYF 545 bp overlap
ChIP GM12892 ENCFF506PGQ 477 bp overlap
ChIP GM12892 ENCFF506PGQ 362 bp overlap
ChIP GM12892 ENCFF542ZFO 350 bp overlap
ChIP GM15510 ENCFF880HVJ 437 bp overlap
ChIP GM18505 ENCFF311CYB 511 bp overlap
ChIP GM18505 ENCFF311CYB 405 bp overlap
ChIP GM19099 ENCFF726IBN 110 bp overlap
ChIP GM19099 ENCFF726IBN 340 bp overlap
ChIP GM19193 ENCFF599VTO 525 bp overlap
ChIP GM19193 ENCFF599VTO 246 bp overlap
ChIP GM23338 ENCFF450WCS 331 bp overlap
ChIP H1 ENCFF566JSR 704 bp overlap
ChIP H1 ENCFF770YBQ 252 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF770YBQ 332 bp overlap
ChIP H1 ENCFF833NJP 161 bp overlap
ChIP H1 ENCFF833NJP 411 bp overlap
ChIP H1 ENCFF833NJP 294 bp overlap
ChIP HCT116 ENCFF508RDJ 465 bp overlap
ChIP HL-60 ENCFF321XKE 256 bp overlap
ChIP HeLa-S3 ENCFF045HUU 189 bp overlap
ChIP HeLa-S3 ENCFF224LWS 697 bp overlap
ChIP HeLa-S3 ENCFF224LWS 494 bp overlap
ChIP HepG2 ENCFF252NAR 630 bp overlap
ChIP HepG2 ENCFF252NAR 346 bp overlap
ChIP HepG2 ENCFF252NAR 144 bp overlap
ChIP HepG2 ENCFF422YUC 373 bp overlap
ChIP HepG2 ENCFF736SLT 274 bp overlap
ChIP PFSK-1 ENCFF576NIT 557 bp overlap
ChIP Panc1 ENCFF290KAB 537 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 409 bp overlap
PRRX2 2 datasets
ChIP WTC11 ENCFF107JGJ 301 bp overlap
ChIP WTC11 ENCFF107JGJ 301 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF939HTZ 502 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 102 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 287 bp overlap
ChIP HepG2 ENCFF561IAJ 283 bp overlap
RBM39 2 datasets
ChIP K-562 GSE120104.RBM39.K-562 146 bp overlap
ChIP K-562 GSE120104.RBM39.K-562 515 bp overlap
REL 1 dataset
ChIP Ramos GSE139810.REL.Ramos 146 bp overlap
SAFB2 1 dataset
ChIP K-562 GSE120104.SAFB2.K-562 223 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 272 bp overlap
SIRT6 1 dataset
ChIP K-562 ENCSR000AUB.SIRT6.K-562 225 bp overlap
SMAD1 1 dataset
ChIP K-562 ENCSR038DJJ.SMAD1.K-562 178 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_PBS GSE134556.SMAD2-3.HUVEC-C_PBS 147 bp overlap
SMAD3 1 dataset
ChIP K-562 ENCSR376XAV.SMAD3.K-562 681 bp overlap
SMAD5 2 datasets
ChIP GM12878 ENCSR251OVJ.SMAD5.GM12878 281 bp overlap
ChIP GM12878 ENCSR251OVJ.SMAD5.GM12878 286 bp overlap
SP4 2 datasets
ChIP WA01 ENCSR000BQV.SP4.WA01 158 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 232 bp overlap
SPI1 1 dataset
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 119 bp overlap
SRSF4 2 datasets
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 66 bp overlap
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 66 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 213 bp overlap
STAT5A 3 datasets
ChIP GM12878 ENCSR000BQZ.STAT5A.GM12878 81 bp overlap
ChIP K-562 ENCSR000BRR.STAT5A.K-562 74 bp overlap
ChIP K-562 ENCSR000BRR.STAT5A.K-562 339 bp overlap
SUPT5H 10 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 203 bp overlap
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 140 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 200 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 182 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 239 bp overlap
ChIP HCT-116_DMSO_pSer666 GSE138548.SUPT5H.HCT-116_DMSO_pSer666 530 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 71 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 219 bp overlap
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 374 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 153 bp overlap
TAF7 1 dataset
ChIP WA01 ENCSR000BLU.TAF7.WA01 125 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap
TCF4 4 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 80 bp overlap
ChIP CAL-1 GSE76147.TCF4.CAL-1 365 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 103 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 215 bp overlap
TEAD1 1 dataset
ChIP K-562 ENCSR591ASD.TEAD1.K-562 268 bp overlap
TEAD4 2 datasets
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 244 bp overlap
ChIP Hep-G2 ENCSR000BRP.TEAD4.Hep-G2 287 bp overlap
TSC22D4 1 dataset
ChIP GM12878 GSE97661.TSC22D4.GM12878 620 bp overlap
U2AF1 3 datasets
ChIP K-562 GSE120104.U2AF1.K-562 73 bp overlap
ChIP K-562 GSE120104.U2AF1.K-562 411 bp overlap
ChIP K-562 ENCSR690GUG.U2AF1.K-562 182 bp overlap
VDR 1 dataset
ChIP LCLGM10861_CALCITRIOL GSE22484.VDR.LCLGM10861_CALCITRIOL 135 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 150 bp overlap
ZBED1 2 datasets
ChIP GM12878 ENCSR207PFI.ZBED1.GM12878 166 bp overlap
ChIP GM12878 ENCSR207PFI.ZBED1.GM12878 466 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 352 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 251 bp overlap
ZKSCAN8 1 dataset
ChIP K562 ENCFF866TZL 374 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 278 bp overlap
ZNF557 1 dataset
ChIP HEK293T GSE78099.ZNF557.HEK293T 397 bp overlap
ZNF77 1 dataset
ChIP K-562 ENCSR844MAB.ZNF77.K-562 609 bp overlap
ZSCAN29 2 datasets
ChIP K-562 ENCSR175SZH.ZSCAN29.K-562 368 bp overlap
ChIP K-562 ENCSR635EXI.ZSCAN29.K-562 305 bp overlap