chr13 : 78,597,128 – 78,597,471
343 bp 86 TFs 2 linked genes
This 343 bp open chromatin element is linked to ENSG00000271776 and POU4F1 and is bound by 86 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000271776 1.0 kb At TSS Proximity
POU4F1 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:78,592,128 – 78,602,471
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 252 bp overlap
ARNT2 1 dataset
Motif ES_0h ES_0h-ARNT2_MA1464.2 8 bp overlap
ARNT::HIF1A 2 datasets
Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap
ARNTL 4 datasets
ChIP GSC_3565 GSE134972.ARNTL.GSC_3565 205 bp overlap
ChIP GSC_387 GSE134972.ARNTL.GSC_387 224 bp overlap
ChIP Hep-G2 ENCSR794LVK.ARNTL.Hep-G2 195 bp overlap
ChIP HepG2 ENCFF217GCH 343 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 50 bp overlap
ChIP H1 ENCFF399KAM 343 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 343 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 138 bp overlap
Arnt 2 datasets
Motif ES_0h ES_0h-Arnt_MA0004.1 6 bp overlap
Motif ES_0h ES_0h-Arnt_MA0004.1 6 bp overlap
Arntl 1 dataset
Motif ES_0h ES_0h-Arntl_MA0603.2 8 bp overlap
BCOR 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 150 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 228 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 343 bp overlap
BHLHE40 5 datasets
Motif ES_0h ES_0h-BHLHE40_MA0464.3 8 bp overlap
ChIP GM12878 ENCFF521IZR 267 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 235 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 221 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 170 bp overlap
BHLHE41 1 dataset
Motif ES_0h ES_0h-BHLHE41_MA0636.1 10 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 199 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 323 bp overlap
BRD4 3 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 200 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 262 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 101 bp overlap
CLOCK 1 dataset
Motif ES_0h ES_0h-CLOCK_MA0819.3 7 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 343 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 305 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 59 bp overlap
Creb3l2 1 dataset
Motif ES_0h ES_0h-Creb3l2_MA0608.1 9 bp overlap
E2F4 2 datasets
Motif ES_0h ES_0h-E2F4_MA0470.3 13 bp overlap
ChIP Hep-G2 ENCSR924LSO.E2F4.Hep-G2 70 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 237 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 310 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 232 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 158 bp overlap
EZH2 33 datasets
ChIP A673 ENCFF790MVL 213 bp overlap
ChIP A673 ENCFF955JRZ 174 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 343 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 343 bp overlap
ChIP GM23248 ENCFF404ZHM 212 bp overlap
ChIP GM23248 ENCFF506FWX 261 bp overlap
ChIP GM23248 ENCFF506FWX 224 bp overlap
ChIP GM23338 ENCFF613YON 343 bp overlap
ChIP GM23338 ENCFF886DXX 273 bp overlap
ChIP H1 ENCFF232NZA 343 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 343 bp overlap
ChIP SK-N-SH ENCFF657FZK 255 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 343 bp overlap
ChIP astrocyte ENCFF365JTP 343 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 343 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 343 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 343 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 343 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 343 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 200 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 247 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 239 bp overlap
ChIP fibroblast of lung ENCFF479BAW 343 bp overlap
ChIP fibroblast of lung ENCFF479BAW 343 bp overlap
ChIP hepatocyte ENCFF118DKH 304 bp overlap
ChIP hepatocyte ENCFF552DZB 343 bp overlap
ChIP keratinocyte ENCFF070STK 168 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 343 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 343 bp overlap
ChIP neural cell ENCFF610EPB 203 bp overlap
ChIP neural progenitor cell ENCFF018MKA 343 bp overlap
ChIP neural progenitor cell ENCFF472NFV 343 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 114 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 66 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 206 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 103 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 137 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 343 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 335 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 343 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 251 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 280 bp overlap
ChIP H1 ENCFF353UJQ 343 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 151 bp overlap
HES2 1 dataset
Motif ES_0h ES_0h-HES2_MA0616.3 9 bp overlap
HES5 1 dataset
Motif ES_0h ES_0h-HES5_MA0821.2 10 bp overlap
HES6 1 dataset
Motif ES_0h ES_0h-HES6_MA1493.1 10 bp overlap
HEY1 1 dataset
Motif ES_0h ES_0h-HEY1_MA0823.1 10 bp overlap
HEY2 1 dataset
Motif ES_0h ES_0h-HEY2_MA0649.2 9 bp overlap
HIF1A 2 datasets
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 218 bp overlap
Motif ES_0h ES_0h-HIF1A_MA1106.2 6 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 327 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 343 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 343 bp overlap
MAFK 2 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MAX 7 datasets
Motif ES_0h ES_0h-MAX_MA0058.4 6 bp overlap
Motif ES_0h ES_0h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF914VQY 155 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 149 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 128 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 155 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 109 bp overlap
MNT 2 datasets
Motif ES_0h ES_0h-MNT_MA0825.2 6 bp overlap
Motif ES_0h ES_0h-MNT_MA0825.2 6 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 154 bp overlap
MYC 3 datasets
Motif ES_0h ES_0h-MYC_MA0147.4 8 bp overlap
ChIP NB69 GSE138295.MYC.NB69 343 bp overlap
ChIP SK-N-SH GSE138295.MYC.SK-N-SH 114 bp overlap
MYCN 4 datasets
Motif ES_0h ES_0h-MYCN_MA0104.5 8 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 142 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 243 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 343 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 228 bp overlap
Mlxip 2 datasets
Motif ES_0h ES_0h-Mlxip_MA0622.2 6 bp overlap
Motif ES_0h ES_0h-Mlxip_MA0622.2 6 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 199 bp overlap
NR2C2 2 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif ES_0h ES_0h-NR2C2_MA0504.2 14 bp overlap
Npas2 1 dataset
Motif ES_0h ES_0h-Npas2_MA0626.2 8 bp overlap
ONECUT1 5 datasets
ChIP H9 ERP004206.ONECUT1.H9 64 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 343 bp overlap
ChIP HepG2 ENCFF243FIR 73 bp overlap
ChIP liver ERP002306.ONECUT1.liver 83 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 343 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 343 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 343 bp overlap
POLR2A 2 datasets
ChIP neural cell ENCFF604SPB 85 bp overlap
ChIP neural cell ENCFF604SPB 156 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 343 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 322 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 343 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 235 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 235 bp overlap
Pparg::Rxra 2 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
RELA 1 dataset
ChIP SGBS GSE64233.RELA.SGBS 238 bp overlap
REST 1 dataset
ChIP H1 ENCFF203SWY 99 bp overlap
RING1 1 dataset
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 343 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 343 bp overlap
ChIP NCCIT GSE71675.RNF2.NCCIT 112 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 225 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 224 bp overlap
SMARCC1 1 dataset
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 187 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 119 bp overlap
SOHLH2 1 dataset
Motif ES_0h ES_0h-SOHLH2_MA1560.2 8 bp overlap
SOX13 1 dataset
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 131 bp overlap
SP1 4 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 59 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 161 bp overlap
SPIB 1 dataset
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 343 bp overlap
SUZ12 9 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 262 bp overlap
ChIP H1 ENCFF881NFR 343 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 326 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 200 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 239 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 343 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 343 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 307 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 343 bp overlap
Spi1 1 dataset
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TCF12 2 datasets
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 232 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 230 bp overlap
TCF3 2 datasets
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 178 bp overlap
TCFL5 1 dataset
Motif ES_0h ES_0h-TCFL5_MA0632.3 8 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 232 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 178 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 75 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 157 bp overlap
Wt1 1 dataset
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
ZBTB33 1 dataset
ChIP SK-N-SH ENCFF667JYU 62 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 297 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 171 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 255 bp overlap
ZNF282 1 dataset
Motif ES_0h ES_0h-ZNF282_MA1154.2 15 bp overlap
ZNF610 2 datasets
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
Motif ES_0h ES_0h-ZNF610_MA1713.2 10 bp overlap
ZNF93 2 datasets
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Motif ES_0h ES_0h-ZNF93_MA1721.2 14 bp overlap
Zfp961 1 dataset
Motif ES_0h ES_0h-Zfp961_MA2126.1 8 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
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