chr13 : 77,696,023 77,696,326
303 bp 79 TFs 2 linked genes
This 303 bp open chromatin element is linked to SLAIN1 and MIR3665 and is bound by 79 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SLAIN1 1.4 kb Proximal Proximity
MIR3665 1.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:77,691,023 – 77,701,326
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 174 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 226 bp overlap
BCL6 4 datasets
ChIP CD4 GSE59933.BCL6.CD4 154 bp overlap
ChIP OCI-Ly1 GSE107920.BCL6.OCI-Ly1 146 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 180 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 224 bp overlap
BRD4 7 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 149 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 275 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 303 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 291 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 246 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 275 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 274 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 173 bp overlap
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 231 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 132 bp overlap
CTCF 1 dataset
ChIP dorsolateral prefrontal cortex ENCFF748IBN 131 bp overlap
DPF2 6 datasets
ChIP BIN-67 GSE117734.DPF2.BIN-67 288 bp overlap
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 303 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 287 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 275 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 303 bp overlap
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 303 bp overlap
DRAP1 1 dataset
ChIP GM12878 GSE97661.DRAP1.GM12878 303 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 303 bp overlap
ChIP H1 ENCFF785DWK 222 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 203 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 160 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 148 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 92 bp overlap
EZH2 15 datasets
ChIP DND-41 ENCFF187XWF 164 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 303 bp overlap
ChIP DOHH2 ENCFF528GDC 272 bp overlap
ChIP GM23248 ENCFF404ZHM 303 bp overlap
ChIP KG-1_shPLZF GSE109619.EZH2.KG-1_shPLZF 232 bp overlap
ChIP OCI-LY7 ENCFF395KPU 257 bp overlap
ChIP OCI-LY7 ENCFF434OYG 257 bp overlap
ChIP PC-3 ENCFF855OUB 225 bp overlap
ChIP PC-3 ENCFF855OUB 303 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 140 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 163 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 303 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 105 bp overlap
ChIP keratinocyte ENCFF070STK 303 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 303 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCFF264DJE 303 bp overlap
HOXB13 1 dataset
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 190 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF824TGK 303 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 303 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCFF238LYK 303 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 201 bp overlap
IRF4 2 datasets
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 182 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 198 bp overlap
KDM1A 2 datasets
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 244 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 278 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 192 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 289 bp overlap
MAX 6 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 114 bp overlap
ChIP NB4 ENCFF966MWB 277 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 303 bp overlap
ChIP liver ENCFF092GVW 303 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 208 bp overlap
ChIP liver ENCSR521IID.MAX.liver 192 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCFF681QPL 303 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 303 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 173 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 303 bp overlap
MYCN 4 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 240 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 159 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 198 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 268 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 270 bp overlap
ChIP hESC GSE18292.NANOG.hESC 99 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 154 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 213 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 259 bp overlap
NR3C1 1 dataset
ChIP GM12878 ENCSR904YPP.NR3C1.GM12878 204 bp overlap
NRF1 2 datasets
ChIP MCF-7_Ab_R157-1-3D4 GSE97661.NRF1.MCF-7_Ab_R157-1-3D4 124 bp overlap
ChIP Namalwa GSE53133.NRF1.Namalwa 177 bp overlap
ONECUT2 2 datasets
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 174 bp overlap
ChIP MKN74 GSE113045.ONECUT2.MKN74 177 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 281 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 136 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 303 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 303 bp overlap
POLR2A 3 datasets
ChIP adrenal gland ENCFF892SFM 298 bp overlap
ChIP neural cell ENCFF604SPB 169 bp overlap
ChIP prostate gland ENCFF881OMH 303 bp overlap
PRDM15 3 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 303 bp overlap
ChIP HepG2 ENCFF259LUZ 229 bp overlap
ChIP WTC11 ENCFF108TMF 303 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 144 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 205 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 303 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 303 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 209 bp overlap
ChIP neural cell ENCFF882LXX 291 bp overlap
RNF2 2 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 303 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 170 bp overlap
RUNX1 2 datasets
ChIP 697 GSE138031.RUNX1.697 170 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 290 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 188 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 282 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 277 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 250 bp overlap
SMARCA4 4 datasets
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 261 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 303 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 245 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 298 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 192 bp overlap
ChIP NPC GSE122631.SOX2.NPC 122 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 98 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 127 bp overlap
SP1 5 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 215 bp overlap
ChIP GM12878 ENCSR000BHK.SP1.GM12878 293 bp overlap
ChIP H1 ENCFF263FUH 119 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 303 bp overlap
ChIP liver ENCFF597LFJ 247 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 303 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 303 bp overlap
TAF1 3 datasets
ChIP WA01 ENCSR000BHO.TAF1.WA01 303 bp overlap
ChIP neural ENCSR000BTX.TAF1.neural 264 bp overlap
ChIP neural cell ENCFF468SPD 303 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 303 bp overlap
TBP 1 dataset
ChIP GM12878 ENCFF571OXR 295 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 52 bp overlap
TCF7 1 dataset
ChIP GM12878 ENCFF749DPM 293 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 105 bp overlap
YY1 1 dataset
ChIP ALL GSE145549.YY1.ALL 225 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 203 bp overlap
ZEB1 3 datasets
ChIP HEK293 ENCFF007TAP 247 bp overlap
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 176 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 167 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 236 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 182 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 303 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 122 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 303 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 288 bp overlap
ZNF695 1 dataset
ChIP HEK293T GSE78099.ZNF695.HEK293T 164 bp overlap
ZNF93 1 dataset
ChIP HEK293T GSE78099.ZNF93.HEK293T 68 bp overlap