chr13 : 33,193,581 33,194,180
599 bp 79 TFs 0 linked genes
This 599 bp open chromatin element has no linked target genes and is bound by 79 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:33,188,581 – 33,199,180
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
ARRB1 1 dataset
ChIP LNCaP-C4-2 GSE55615.ARRB1.LNCaP-C4-2 136 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 96 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 425 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 388 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 102 bp overlap
BRD4 12 datasets
ChIP BE2C GSE80151.BRD4.BE2C 336 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 113 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 246 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 599 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 336 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 599 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 543 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 305 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 184 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 135 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 297 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 599 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 361 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 599 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 432 bp overlap
CREB5 2 datasets
ChIP SK-N-SH ENCFF144PMI 345 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 383 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 87 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 244 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 205 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 415 bp overlap
ERG 3 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 183 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 259 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 196 bp overlap
ETS1 4 datasets
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 190 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 167 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 195 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 190 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 268 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 432 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 215 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 164 bp overlap
FOXL2 1 dataset
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 334 bp overlap
GATA2 6 datasets
ChIP SH-SY5Y ENCFF485YIB 405 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 506 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 428 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 420 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 366 bp overlap
GATA3 9 datasets
ChIP Kelly GSE65664.GATA3.Kelly 340 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 297 bp overlap
ChIP NGP GSE65664.GATA3.NGP 180 bp overlap
ChIP SH-SY5Y ENCFF475HYF 188 bp overlap
ChIP SH-SY5Y ENCFF475HYF 364 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 521 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 439 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 503 bp overlap
ChIP SK-N-SH ENCFF040SSB 229 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 478 bp overlap
ChIP DE DE-GATA4-2 536 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 279 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 466 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 392 bp overlap
ChIP DE DE-GATA6-2 548 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 540 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 453 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 382 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 517 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 514 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 553 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 491 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 292 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 354 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 134 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 545 bp overlap
HSF1 2 datasets
ChIP MO91 GSE45852.HSF1.MO91 91 bp overlap
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 88 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 599 bp overlap
ChIP SK-N-SH ENCFF285GEQ 326 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 356 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 128 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 297 bp overlap
JUNB 2 datasets
ChIP HAEC GSE89970.JUNB.HAEC 267 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 106 bp overlap
KDM1A 4 datasets
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 201 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 254 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 111 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 250 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 200 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 311 bp overlap
MAX 4 datasets
ChIP H1 ENCFF914VQY 294 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 188 bp overlap
ChIP SK-N-SH ENCFF285LXR 276 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 108 bp overlap
MAZ 1 dataset
ChIP GM12878 ENCFF453CES 209 bp overlap
MED1 6 datasets
ChIP GM12878 GSE93080.MED1.GM12878 392 bp overlap
ChIP GM12878 GSE93080.MED1.GM12878 140 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 276 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 376 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 363 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 191 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 175 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 519 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 155 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 129 bp overlap
MYC 4 datasets
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 161 bp overlap
ChIP NB69 GSE138295.MYC.NB69 159 bp overlap
ChIP endothelial cell of umbilical vein ENCFF537XOZ 179 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLU.MYC.endothelial_umbilical-vein 139 bp overlap
MYCN 9 datasets
ChIP BE2C GSE80151.MYCN.BE2C 236 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 373 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 425 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 147 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 369 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 332 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 349 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 236 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 296 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 333 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 351 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 170 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 160 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 307 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 397 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 599 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF303XUJ 335 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 139 bp overlap
PRDM15 1 dataset
ChIP GM12878 ENCFF445SXY 70 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 271 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 365 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 542 bp overlap
RELA 7 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 150 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 195 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 189 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 165 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 209 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 178 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 244 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 521 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 386 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 309 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 407 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 215 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 301 bp overlap
SMARCA4 4 datasets
ChIP NGP GSE134626.SMARCA4.NGP 244 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 419 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 338 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 347 bp overlap
SNAI2 3 datasets
ChIP SK-N-SH ENCFF449PID 217 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 79 bp overlap
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 129 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 269 bp overlap
ChIP hESC GSE18292.SOX2.hESC 98 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 202 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 259 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 474 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 360 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 508 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 437 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 280 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 280 bp overlap
ChIP SK-N-SH ENCFF754TJT 401 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 208 bp overlap
TOX2 2 datasets
ChIP SK-N-SH ENCFF415OYE 297 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 218 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 252 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 195 bp overlap
WRNIP1 1 dataset
ChIP GM12878 ENCFF384UKU 237 bp overlap
YY1 6 datasets
ChIP GM12878 ENCFF150EFU 119 bp overlap
ChIP GM12878 ENCFF908JTL 178 bp overlap
ChIP GM12878 ENCSR000EUM.YY1.GM12878 74 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 89 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 77 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 102 bp overlap
ZBTB4 1 dataset
ChIP GM12878 ENCFF811BTD 105 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 283 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 415 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 86 bp overlap
ZNF687 3 datasets
ChIP GM12878 ENCFF233SGE 61 bp overlap
ChIP GM12878 ENCFF233SGE 181 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 599 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 194 bp overlap