chr12 : 107,634,992 107,635,543
551 bp 94 TFs 3 linked genes
This 551 bp open chromatin element is linked to ABTB3, PWP1, and PRDM4 and is bound by 94 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ABTB3 161 bp At TSS Proximity
PWP1 50.5 kb Distal Multiome
PRDM4 126.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:107,629,992 – 107,640,543
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 479 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 551 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 328 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 185 bp overlap
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
Atf1 2 datasets
Motif DE_12h DE_12h-Atf1_MA0604.1 8 bp overlap
Motif ES_0h ES_0h-Atf1_MA0604.1 8 bp overlap
BACH1 2 datasets
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
Motif ES_0h ES_0h-BACH1_MA1633.2 9 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 168 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 347 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 379 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 2 datasets
ChIP hESC GSE33281.BRD4.hESC 116 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 232 bp overlap
Bhlha15 2 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 315 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 191 bp overlap
CREB1 4 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 371 bp overlap
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 271 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 213 bp overlap
CTCF 1 dataset
ChIP U-937 ERP008568.CTCF.U-937 256 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 378 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 169 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 264 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 211 bp overlap
EP300 1 dataset
ChIP H1 ENCFF927IYK 297 bp overlap
ERG 3 datasets
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 180 bp overlap
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 165 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 196 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 192 bp overlap
ESRRA 1 dataset
ChIP WTC11 ENCFF591YCA 320 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 321 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 124 bp overlap
ETV2 1 dataset
Motif ES_0h ES_0h-ETV2_MA0762.2 9 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 336 bp overlap
EZH2 2 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 267 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 219 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 156 bp overlap
FOS::JUN 2 datasets
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
Motif ES_0h ES_0h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUND 2 datasets
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
Motif ES_0h ES_0h-FOSJUND_MA1141.2 9 bp overlap
FOSL1::JUN 2 datasets
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
Motif ES_0h ES_0h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUND 2 datasets
Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap
Motif ES_0h ES_0h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2::JUN 2 datasets
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
Motif ES_0h ES_0h-FOSL2JUN_MA1130.2 9 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 308 bp overlap
ChIP DE DE-GATA4-2 458 bp overlap
ChIP foregut GSE117136.GATA4.foregut 356 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 258 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 327 bp overlap
ChIP DE DE-GATA6-2 493 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 306 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 362 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 314 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 352 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 414 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 428 bp overlap
ChIP foregut GSE117136.GATA6.foregut 302 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 222 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 266 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 338 bp overlap
IRF3 1 dataset
Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap
IRF9 1 dataset
Motif ES_0h ES_0h-IRF9_MA0653.1 15 bp overlap
JUN 9 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 358 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 531 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 331 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 346 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 469 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 134 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 551 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 354 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 181 bp overlap
JUN::JUNB 2 datasets
Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap
Motif ES_0h ES_0h-JUNJUNB_MA1132.2 8 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 187 bp overlap
KDM4A 2 datasets
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 170 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 170 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 283 bp overlap
MYF5 2 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
MYOD1 2 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
MYOG 2 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
MZF1 1 dataset
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
NANOG 5 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 551 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 186 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 251 bp overlap
NFATC4 1 dataset
Motif ES_0h ES_0h-NFATC4_MA1525.3 9 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 214 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 321 bp overlap
NHLH1 2 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PAX6 1 dataset
Motif ES_0h ES_0h-PAX6_MA0069.1 14 bp overlap
POLR2A 5 datasets
ChIP H1 ENCFF566JSR 157 bp overlap
ChIP H1 ENCFF566JSR 335 bp overlap
ChIP H1 ENCFF770YBQ 247 bp overlap
ChIP H1 ENCFF770YBQ 470 bp overlap
ChIP H1 ENCFF833NJP 156 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 235 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 332 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 551 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 243 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 138 bp overlap
PPARG 2 datasets
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap
Ptf1A 2 datasets
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 331 bp overlap
ChIP H1 ENCFF905HFL 462 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 527 bp overlap
RELA 10 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 388 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 250 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 199 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 303 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 349 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 161 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 203 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 286 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 190 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 206 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 307 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 123 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 199 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 347 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 477 bp overlap
SMARCA4 3 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 161 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 172 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 220 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 241 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 179 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 224 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 267 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 421 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 124 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 485 bp overlap
ChIP H1 ENCFF478SZO 291 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 420 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 169 bp overlap
ChIP H1 ENCFF061XZZ 337 bp overlap
TBP 4 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 146 bp overlap
ChIP hESC GSE122298.TBP.hESC 147 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 110 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 323 bp overlap
TBX20 2 datasets
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif ES_0h ES_0h-TBX20_MA0689.1 11 bp overlap
TBX21 2 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif ES_0h ES_0h-TBX21_MA0690.3 10 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 335 bp overlap
TEAD1 3 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 208 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 183 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 131 bp overlap
TEAD4 4 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 515 bp overlap
ChIP H1 ENCFF778PAX 136 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 174 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 390 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 551 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 503 bp overlap
TFAP4 2 datasets
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 212 bp overlap
ZIM3 1 dataset
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 117 bp overlap
ZNF281 1 dataset
ChIP WTC11 ENCFF551GAV 251 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 173 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 109 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap