chr12 : 82,708,307 82,708,945
638 bp 94 TFs 0 linked genes
This 638 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:82,703,307 – 82,713,945
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP GSE80256.AR.LNCaP 278 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 280 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 248 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 617 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 289 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 250 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 216 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 263 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 84 bp overlap
BRD4 9 datasets
ChIP BE2C GSE80151.BRD4.BE2C 233 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 587 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 233 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 638 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 638 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 553 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 489 bp overlap
ChIP hESC GSE33281.BRD4.hESC 137 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 238 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 136 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 175 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 59 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 148 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 370 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 420 bp overlap
CTCF 8 datasets
ChIP GSC23 GSE139416.CTCF.GSC23 416 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 505 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 505 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 541 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 511 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 329 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 391 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 527 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 419 bp overlap
ChIP BLaER1 ENCFF274GAT 255 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 182 bp overlap
ELF1 2 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 156 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 130 bp overlap
EP300 3 datasets
ChIP AML GSE131939.EP300.AML 176 bp overlap
ChIP AML GSE131939.EP300.AML 135 bp overlap
ChIP SK-N-SH ENCFF829RWA 113 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 176 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 205 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 218 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 111 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 263 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 229 bp overlap
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 328 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 199 bp overlap
GATA2 1 dataset
ChIP ESF GSE108408.GATA2.ESF 67 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 249 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 304 bp overlap
HAND2 4 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 60 bp overlap
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 252 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 107 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 487 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 147 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 95 bp overlap
ChIP SK-N-SH ENCFF285GEQ 156 bp overlap
KDM1A 2 datasets
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 104 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 223 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 336 bp overlap
MAF 1 dataset
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
MAX 6 datasets
ChIP H1 ENCFF601FOM 325 bp overlap
ChIP H1 ENCFF601FOM 302 bp overlap
ChIP H1 ENCFF914VQY 153 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 185 bp overlap
ChIP HepG2 ENCFF507HCX 579 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 424 bp overlap
MITF 6 datasets
ChIP 501-mel GSE137522.MITF.501-mel 380 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 250 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 374 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 370 bp overlap
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 210 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 286 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 196 bp overlap
MYB 1 dataset
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYC 2 datasets
ChIP NB69 GSE138295.MYC.NB69 604 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 638 bp overlap
MYCN 13 datasets
ChIP BE2C GSE80151.MYCN.BE2C 332 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 638 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 463 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 106 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 273 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 638 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 213 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 293 bp overlap
ChIP NGP GSE80151.MYCN.NGP 268 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 287 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 273 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 333 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 332 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 231 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 404 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 192 bp overlap
NCOA1 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA1.MCF-7_E2 95 bp overlap
NCOR2 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.NCOR2.B-cell_GERMINAL_CENTER 260 bp overlap
NR2F2 1 dataset
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 84 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
OLIG2 3 datasets
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 638 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 437 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 330 bp overlap
PAX3-FOXO1 2 datasets
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 190 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 194 bp overlap
PGR 3 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 638 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 627 bp overlap
ChIP myometrium_TP1 GSE137550.PGR.myometrium_TP1 182 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 553 bp overlap
POLR2A 12 datasets
ChIP breast epithelium ENCFF960NNA 196 bp overlap
ChIP sigmoid colon ENCFF101ILL 64 bp overlap
ChIP sigmoid colon ENCFF725QFT 478 bp overlap
ChIP sigmoid colon ENCFF748YVT 202 bp overlap
ChIP sigmoid colon ENCFF754JQR 133 bp overlap
ChIP sigmoid colon ENCFF754JQR 272 bp overlap
ChIP stomach ENCFF278MYS 241 bp overlap
ChIP transverse colon ENCFF607LKE 66 bp overlap
ChIP transverse colon ENCFF607LKE 371 bp overlap
ChIP transverse colon ENCFF610RWV 241 bp overlap
ChIP transverse colon ENCFF840PXT 212 bp overlap
ChIP vagina ENCFF384GAB 365 bp overlap
POU4F2 2 datasets
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 167 bp overlap
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 121 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 187 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 147 bp overlap
REST 1 dataset
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 137 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 159 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 211 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 71 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 123 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 253 bp overlap
SMARCA4 8 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 343 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 331 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 270 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 202 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 219 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 572 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 162 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 272 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 176 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 563 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 213 bp overlap
SPI1 10 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 99 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 212 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 209 bp overlap
ChIP GM12891 ENCFF563IUT 158 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 175 bp overlap
ChIP HL-60 ENCFF645GBT 216 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 231 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 377 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 111 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 130 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 201 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 166 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 225 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 313 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 54 bp overlap
ChIP SK-N-SH ENCFF270OWF 275 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 83 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 83 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 324 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 473 bp overlap
TWIST1 2 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 97 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 97 bp overlap
USF1 9 datasets
ChIP H1 ENCFF090WVU 153 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 205 bp overlap
ChIP HepG2 ENCFF201JKA 238 bp overlap
ChIP HepG2 ENCFF807KYJ 135 bp overlap
ChIP SK-N-SH ENCFF967PDP 311 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 287 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 233 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 292 bp overlap
ChIP WTC11 ENCFF699QGS 425 bp overlap
USF2 6 datasets
ChIP GM12878 GSE97661.USF2.GM12878 467 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 311 bp overlap
ChIP Hep-G2 ENCSR000EEF.USF2.Hep-G2 185 bp overlap
ChIP HepG2 ENCFF671JRC 265 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 168 bp overlap
ChIP WTC11 ENCFF139JAW 295 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 291 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 441 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 606 bp overlap
ZFP42 2 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZNF143 2 datasets
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 358 bp overlap
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 307 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap