chr1 : 208,270,583 208,271,117
534 bp 102 TFs 1 linked gene
This 534 bp open chromatin element is linked to ENSG00000286198 and is bound by 102 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000286198 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:208,265,583 – 208,276,117
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
BRD4 7 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 191 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 172 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 173 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 211 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 276 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 231 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 141 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 276 bp overlap
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 221 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 417 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 534 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF335XTP 251 bp overlap
ChIP BLaER1 ENCFF798NMV 114 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 331 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 267 bp overlap
EZH2 7 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 534 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 266 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 148 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 302 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 128 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 107 bp overlap
ChIP neural progenitor cell ENCFF018MKA 304 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 333 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 404 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 231 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 182 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 185 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 534 bp overlap
ChIP DE DE-FOXA2-2 451 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 534 bp overlap
ChIP DE DE-GATA4-2 531 bp overlap
ChIP foregut GSE117136.GATA4.foregut 333 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 501 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 521 bp overlap
ChIP DE DE-GATA6-2 498 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 534 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 534 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 534 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 462 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 509 bp overlap
ChIP foregut GSE117136.GATA6.foregut 360 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 534 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 534 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 278 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 412 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 484 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 417 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 215 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 269 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 312 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 372 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 395 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 343 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 484 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 456 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 490 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 235 bp overlap
KLF1 3 datasets
ChIP HEK293 ENCFF159QSW 422 bp overlap
ChIP HEK293 ENCFF159QSW 223 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 286 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCFF326EGX 370 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCFF929IAJ 403 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 512 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 186 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 446 bp overlap
ChIP HEK293 ENCFF994GSG 365 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 377 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 411 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 212 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 266 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 171 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 341 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 471 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 478 bp overlap
ChIP hESC GSE18292.NANOG.hESC 210 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 246 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 189 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 174 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 162 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 289 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 476 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 225 bp overlap
OVOL3 2 datasets
ChIP HEK293 ENCFF898STB 322 bp overlap
ChIP HEK293 ENCSR768LIO.OVOL3.HEK293 433 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 487 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 154 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 286 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 387 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 533 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 304 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 484 bp overlap
RARA 4 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 376 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 326 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 534 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 294 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 339 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 534 bp overlap
REST 3 datasets
ChIP neural ENCSR000BTV.REST.neural 165 bp overlap
ChIP neural cell ENCFF882LXX 119 bp overlap
ChIP neural cell ENCFF882LXX 488 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 179 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 268 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 194 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 306 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 229 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 337 bp overlap
SMAD2 4 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 400 bp overlap
ChIP hESC GSE29422.SMAD2.hESC 212 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 436 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 392 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 534 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 534 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 534 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 534 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 534 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 534 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 259 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 203 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 367 bp overlap
SMAD4 2 datasets
ChIP endoderm GSE29422.SMAD4.endoderm 298 bp overlap
ChIP hESC GSE29422.SMAD4.hESC 137 bp overlap
SMARCA4 3 datasets
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 86 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 371 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 318 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 380 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 321 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 298 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 249 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 419 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 324 bp overlap
SOX2 3 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 238 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 244 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 276 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 338 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 167 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 422 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 203 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 249 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 138 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 264 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 264 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 259 bp overlap
TSHZ1 2 datasets
ChIP HEK293 ENCFF893BGV 330 bp overlap
ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 249 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 305 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 484 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 167 bp overlap
ZBTB1 1 dataset
ChIP HEK293 ENCFF916DEM 285 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 448 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 203 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 128 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 327 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 465 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 368 bp overlap
ZC3H10 1 dataset
ChIP SK-N-SH ENCFF465WAR 291 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 144 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 333 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 421 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 476 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 493 bp overlap
ZNF322 1 dataset
ChIP HEK293 GSE76494.ZNF322.HEK293 167 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 390 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 368 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 356 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 416 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 343 bp overlap
ZNF391 1 dataset
ChIP HEK293 ENCFF835SNY 333 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 373 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 445 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 204 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 202 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 330 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 355 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 321 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 306 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 420 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 397 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 446 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 323 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 260 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 185 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 225 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 340 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 163 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 339 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 457 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 154 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 387 bp overlap