chr11 : 28,607,025 28,607,271
246 bp 102 TFs 0 linked genes
This 246 bp open chromatin element has no linked target genes and is bound by 102 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:28,602,025 – 28,612,271
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 149 bp overlap
AR 2 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 96 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 92 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRCA1 1 dataset
ChIP SH-EP_pWZL-MYCNwt GSE111905.BRCA1.SH-EP_pWZL-MYCNwt 69 bp overlap
BRD2 5 datasets
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 246 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 123 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 123 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 246 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 156 bp overlap
BRD4 12 datasets
ChIP 402-91 GSE111253.BRD4.402-91 242 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 117 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 246 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 246 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 246 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 85 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 233 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 233 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 246 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 246 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 189 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 178 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 150 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 242 bp overlap
CDKN1B 3 datasets
ChIP MDA-BoM-1833_shp27 GSE112444.CDKN1B.MDA-BoM-1833_shp27 243 bp overlap
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 246 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 246 bp overlap
CTCF 6 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 176 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 91 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 82 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 205 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 114 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 115 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 246 bp overlap
E2F6 3 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP H1 ENCFF785DWK 246 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 204 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 117 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000AUQ.EP300.WA01 150 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 204 bp overlap
ESR1 4 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 64 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 165 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 170 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 118 bp overlap
ETS1 2 datasets
ChIP 786-O GSE86092.ETS1.786-O 210 bp overlap
ChIP SCC-25 GSE109884.ETS1.SCC-25 216 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 241 bp overlap
ETV4 1 dataset
ChIP T-47D GSE129803.ETV4.T-47D 246 bp overlap
FLI1 1 dataset
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 209 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL2 3 datasets
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 224 bp overlap
ChIP SK-N-SH ENCFF127ZDW 246 bp overlap
FOXP2 2 datasets
ChIP PFSK-1 ENCFF349WGE 218 bp overlap
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 246 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 211 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 179 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 120 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 102 bp overlap
HIF1A 2 datasets
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 246 bp overlap
ChIP PC-3_siOC2 GSE106305.HIF1A.PC-3_siOC2 207 bp overlap
JUN 9 datasets
ChIP 786-O GSE86092.JUN.786-O 171 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 246 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 246 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 129 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 246 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 223 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 246 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 246 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 246 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 4 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP H1 ENCFF010YXS 246 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 174 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 103 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 73 bp overlap
KDM5B 2 datasets
ChIP SUM159 GSE46055.KDM5B.SUM159 95 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 140 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 213 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 151 bp overlap
ChIP SK-N-SH ENCFF285LXR 246 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 188 bp overlap
ChIP WTC11 ENCFF223QFY 246 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 184 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 90 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 214 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 246 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 125 bp overlap
MYC 6 datasets
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 122 bp overlap
ChIP U2OS_Doxy GSE77328.MYC.U2OS_Doxy 162 bp overlap
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 118 bp overlap
ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 105 bp overlap
ChIP U2OS_HA-OmoMYCwt_Doxy GSE77328.MYC.U2OS_HA-OmoMYCwt_Doxy 149 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 236 bp overlap
MYCN 2 datasets
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 162 bp overlap
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 241 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 163 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 246 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 175 bp overlap
NR3C1 5 datasets
ChIP A-549 ENCSR000BJR.NR3C1.A-549 186 bp overlap
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 68 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 174 bp overlap
ChIP U2OS_SHNS GSE65847.NR3C1.U2OS_SHNS 112 bp overlap
ChIP U2OS_siHic5siNS GSE109383.NR3C1.U2OS_siHic5siNS 246 bp overlap
PGR 8 datasets
ChIP AB32 GSE31129.PGR.AB32 158 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 86 bp overlap
ChIP T-47D_PG GSE68356.PGR.T-47D_PG 72 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 107 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 73 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 78 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 80 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 246 bp overlap
POLR2A 2 datasets
ChIP H54 ENCFF398BXN 186 bp overlap
ChIP vagina ENCFF384GAB 246 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 175 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 195 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 246 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 182 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 246 bp overlap
RBPJ 1 dataset
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 175 bp overlap
RELA 4 datasets
ChIP 786-O GSE86092.RELA.786-O 246 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 239 bp overlap
ChIP KB_IL GSE52469.RELA.KB_IL 192 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 143 bp overlap
REST 3 datasets
ChIP PFSK-1 ENCFF668WMP 246 bp overlap
ChIP PFSK-1 ENCFF845VHA 231 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 156 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 117 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 200 bp overlap
SIN3A 1 dataset
ChIP PFSK-1 ENCFF218MAY 246 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 89 bp overlap
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 78 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 172 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 246 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 179 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 142 bp overlap
SOX4 1 dataset
ChIP MDA-MB-231_TGFb GSE104760.SOX4.MDA-MB-231_TGFb 224 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 101 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 198 bp overlap
STAT3 4 datasets
ChIP HCC1143_EtOH GSE85579.STAT3.HCC1143_EtOH 156 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 246 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 213 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 189 bp overlap
TP53 5 datasets
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 246 bp overlap
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 246 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 107 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 153 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 67 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 109 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 206 bp overlap
ZFX 2 datasets
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 203 bp overlap
ChIP HCT-116 GSE102616.ZFX.HCT-116 203 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZMYND8 1 dataset
ChIP MDA-MB-231 GSE108833.ZMYND8.MDA-MB-231 148 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap