chr11 : 24,679,714 – 24,680,536
822 bp 101 TFs 0 linked genes
This 822 bp open chromatin element has no linked target genes and is bound by 101 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:24,674,714 – 24,685,536
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
101 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_DHT24H GSE58428.AR.LNCaP_DHT24H 174 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 581 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 230 bp overlap
BRD4 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 272 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 272 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 253 bp overlap
ChIP H1 ENCFF126NLU 460 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 348 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 616 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 427 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 299 bp overlap
CTCF 3 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 564 bp overlap
CUX2 1 dataset
Motif ES_0h ES_0h-CUX2_MA0755.2 9 bp overlap
Crx 1 dataset
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
Dmrt1 3 datasets
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap
Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap
EOMES 1 dataset
Motif ES_0h ES_0h-EOMES_MA0800.2 9 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 313 bp overlap
EWSR1-FLI1 1 dataset
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 272 bp overlap
Foxq1 1 dataset
Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 273 bp overlap
GSC 1 dataset
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 218 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 141 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
Hmga1 1 dataset
Motif ES_0h ES_0h-Hmga1_MA2124.1 8 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 287 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 357 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 299 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 170 bp overlap
MAFF 1 dataset
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MAFK 1 dataset
ChIP WA01 ENCSR000EBS.MAFK.WA01 168 bp overlap
MEIS1 2 datasets
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MGA 2 datasets
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
Motif ES_0h ES_0h-MGA_MA0801.1 8 bp overlap
MGA::EVX1 3 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
MZF1 1 dataset
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
Mafb 1 dataset
Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 153 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 795 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 469 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 226 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 750 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 603 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 777 bp overlap
ChIP hESC GSE18292.NANOG.hESC 94 bp overlap
ChIP hESC GSE18292.NANOG.hESC 246 bp overlap
ChIP hESC GSE18292.NANOG.hESC 101 bp overlap
NFIA 1 dataset
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
NKX2-4 2 datasets
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 2 datasets
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-8_MA0673.2 8 bp overlap
NRL 1 dataset
Motif ES_0h ES_0h-NRL_MA0842.3 12 bp overlap
OSR1 2 datasets
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
Motif ES_0h ES_0h-OSR1_MA1542.2 8 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap
OTX1 1 dataset
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
PITX1 1 dataset
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POU2F1::SOX2 1 dataset
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU5F1 8 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 690 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 649 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 250 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 393 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 175 bp overlap
POU6F1 1 dataset
Motif ES_0h ES_0h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 771 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 725 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 722 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 646 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 163 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
REST 3 datasets
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP neural ENCSR000BTV.REST.neural 265 bp overlap
ChIP neural cell ENCFF882LXX 505 bp overlap
RHOXF1 1 dataset
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 50 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 204 bp overlap
SFPQ 1 dataset
ChIP LTAD_siCTBP1-AS-EtOH GSE94577.SFPQ.LTAD_siCTBP1-AS-EtOH 200 bp overlap
SMAD2 1 dataset
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 164 bp overlap
SMARCA4 4 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 236 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 224 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 622 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 498 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 262 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 611 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 371 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 439 bp overlap
SOX10 4 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 358 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 813 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 662 bp overlap
SOX21 1 dataset
Motif ES_0h ES_0h-SOX21_MA0866.1 15 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 148 bp overlap
STAT1::STAT2 1 dataset
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
Stat5a 2 datasets
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap
Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
TBP 2 datasets
Motif ES_0h ES_0h-TBP_MA0108.3 7 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 163 bp overlap
TBR1 1 dataset
Motif ES_0h ES_0h-TBR1_MA0802.2 9 bp overlap
TBX1 2 datasets
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
Motif ES_0h ES_0h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
Motif ES_0h ES_0h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif ES_0h ES_0h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif ES_0h ES_0h-TBX20_MA0689.1 11 bp overlap
TBX21 2 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif ES_0h ES_0h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap
TBX4 2 datasets
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
Motif ES_0h ES_0h-TBX4_MA0806.1 8 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 449 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2A 4 datasets
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 4 datasets
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0811.2 11 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 4 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0815.1 13 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0815.1 13 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 221 bp overlap
Tbx6 1 dataset
Motif ES_0h ES_0h-Tbx6_MA1567.3 9 bp overlap
ZFP14 1 dataset
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZKSCAN1 1 dataset
Motif ES_0h ES_0h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF136 2 datasets
Motif ES_0h ES_0h-ZNF136_MA1588.1 15 bp overlap
Motif ES_0h ES_0h-ZNF136_MA1588.1 15 bp overlap
ZNF189 2 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 547 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 638 bp overlap
ZNF701 1 dataset
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF707 1 dataset
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
ZNF75A 1 dataset
Motif ES_0h ES_0h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif ES_0h ES_0h-ZNF75D_MA1601.2 12 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Huangfu Lab · Publications · Resources · Contact