chr10 : 124,451,296 124,451,677
381 bp 124 TFs 2 linked genes
This 381 bp open chromatin element is linked to NKX1-2 and ENSG00000271434 and is bound by 124 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
NKX1-2 1.3 kb Proximal Proximity
ENSG00000271434 3.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:124,446,296 – 124,456,677
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
124 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa GSE40632.AFF4.HeLa 71 bp overlap
AR 1 dataset
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 247 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 381 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 243 bp overlap
ATF6 1 dataset
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Arid3b 1 dataset
Motif DE_12h DE_12h-Arid3b_MA0601.2 7 bp overlap
Arid5a 1 dataset
Motif DE_12h DE_12h-Arid5a_MA0602.2 8 bp overlap
BACH1 3 datasets
ChIP H1 ENCFF282VDB 138 bp overlap
ChIP SW1990 GSE124406.BACH1.SW1990 139 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 230 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 356 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 381 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 144 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CREB3 1 dataset
Motif DE_12h DE_12h-CREB3_MA0638.2 12 bp overlap
CREB3L1 1 dataset
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 233 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 345 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 184 bp overlap
ESR1 2 datasets
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 75 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 278 bp overlap
EZH2 14 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 336 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 381 bp overlap
ChIP GM23248 ENCFF404ZHM 106 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 142 bp overlap
ChIP astrocyte ENCFF365JTP 381 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 381 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 381 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 381 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 164 bp overlap
ChIP hepatocyte ENCFF552DZB 342 bp overlap
ChIP hepatocyte ENCFF552DZB 110 bp overlap
ChIP neural progenitor cell ENCFF018MKA 90 bp overlap
ChIP neural progenitor cell ENCFF018MKA 312 bp overlap
ChIP neural progenitor cell ENCFF472NFV 162 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 160 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GATA6 2 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 98 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 340 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
HOXB9 1 dataset
Motif DE_12h DE_12h-HOXB9_MA1503.2 9 bp overlap
HOXC10 1 dataset
Motif DE_12h DE_12h-HOXC10_MA0905.2 9 bp overlap
HOXC13 1 dataset
Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
Hoxa11 1 dataset
Motif DE_12h DE_12h-Hoxa11_MA0911.2 9 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 225 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 381 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 381 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 381 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 381 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 242 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 306 bp overlap
ChIP K562 ENCFF455EEO 299 bp overlap
MAFK 3 datasets
ChIP A549 ENCFF371EPR 242 bp overlap
ChIP H1 ENCFF854XWE 224 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 194 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCFF064TDQ 301 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 197 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Mecom 1 dataset
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 381 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 319 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 381 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 336 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 381 bp overlap
ChIP hESC GSE18292.NANOG.hESC 234 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 143 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFE2 4 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 275 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 174 bp overlap
ChIP K562 ENCFF047YKA 177 bp overlap
ChIP K562 ENCFF163BSI 205 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 306 bp overlap
NFE2L2 7 datasets
ChIP A-549 ENCSR584GHV.NFE2L2.A-549 143 bp overlap
ChIP HeLa-S3 ENCSR707IUN.NFE2L2.HeLa-S3 137 bp overlap
ChIP Hep-G2 ENCSR488EES.NFE2L2.Hep-G2 177 bp overlap
ChIP HepG2 ENCFF178DRC 201 bp overlap
ChIP IMR-90 ENCFF059WEE 177 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 152 bp overlap
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 165 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIC 3 datasets
Motif DE_12h DE_12h-NFIC_MA0161.3 7 bp overlap
ChIP Ishikawa ENCFF029AAD 282 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 136 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 381 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 381 bp overlap
NKX6-1 1 dataset
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 1 dataset
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 305 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 153 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 381 bp overlap
POU5F1 5 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 372 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 229 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 381 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 381 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 157 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 216 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 80 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 175 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 365 bp overlap
ChIP H1 ENCFF042ZSL 144 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 381 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 381 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 351 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 349 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 381 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 251 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 112 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 193 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 215 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 255 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 94 bp overlap
SOX12 1 dataset
Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX18 1 dataset
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
SOX2 3 datasets
ChIP H9 GSE46837.SOX2.H9 177 bp overlap
ChIP hESC GSE18292.SOX2.hESC 212 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 351 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
SP1 3 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 179 bp overlap
ChIP WTC11 ENCFF688PEU 238 bp overlap
ChIP WTC11 ENCFF688PEU 381 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF881NFR 122 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.SUZ12.Karpas-422_CPI360-D4 106 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 381 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 126 bp overlap
TBP 1 dataset
ChIP H1 ENCFF859IIO 341 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCFF772OTG 301 bp overlap
ChIP Ishikawa ENCFF772OTG 173 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 244 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 183 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 168 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 136 bp overlap
ZBTB7A 3 datasets
ChIP Ishikawa ENCFF191NFH 375 bp overlap
ChIP Ishikawa ENCFF191NFH 381 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 261 bp overlap
ZNF214 1 dataset
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 302 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 92 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 114 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 165 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 332 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap