chr10 : 121,002,715 121,003,391
676 bp 93 TFs 4 linked genes
This 676 bp open chromatin element is linked to 4 target genes and is bound by 93 transcription factors.
Linked Genes
4 genes
Link type
Gene Expression Dist. to TSS Distance Link type
WDR11 151.7 kb Distal Multiome
WDR11-DT 151.8 kb Distal Multiome
LINC02930 185.1 kb Distal Multiome
ATE1 925.4 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:120,997,715 – 121,008,391
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 244 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 154 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 138 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 263 bp overlap
ASCL1 1 dataset
Motif DE_48h DE_48h-ASCL1_MA1631.2 9 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 140 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 97 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 239 bp overlap
BRD4 4 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 354 bp overlap
ChIP HCC1806_300nMJQ1_24h GSE87418.BRD4.HCC1806_300nMJQ1_24h 316 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 138 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 173 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 527 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 516 bp overlap
CEBPB 5 datasets
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 138 bp overlap
ChIP HCT116 ENCFF097OLY 243 bp overlap
ChIP HeLa-S3 ENCFF722WEG 172 bp overlap
ChIP MCF-7 ENCFF772ZTQ 173 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 109 bp overlap
CHD4 2 datasets
ChIP HaCaT GSE139685.CHD4.HaCaT 163 bp overlap
ChIP HaCaT GSE139685.CHD4.HaCaT 178 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 93 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 399 bp overlap
CREBBP 3 datasets
ChIP LS180 GSE39277.CREBBP.LS180 83 bp overlap
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 590 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 556 bp overlap
CTNNB1 1 dataset
ChIP LS180 GSE31939.CTNNB1.LS180 140 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 343 bp overlap
ChIP BLaER1 ENCFF460KDD 150 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 266 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 606 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 597 bp overlap
ERG 11 datasets
ChIP RWPE-1 GSE114241.ERG.RWPE-1 625 bp overlap
ChIP RWPE-1 GSE37752.ERG.RWPE-1 141 bp overlap
ChIP VCaP GSE28950.ERG.VCaP 267 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 240 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 240 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 225 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 240 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 218 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 174 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 628 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 516 bp overlap
ESR1 2 datasets
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 249 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 181 bp overlap
ETV1 2 datasets
ChIP LNCaP GSE47120.ETV1.LNCaP 190 bp overlap
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 90 bp overlap
FIGLA 2 datasets
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
FOS 4 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 562 bp overlap
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 95 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 156 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 198 bp overlap
FOSL1 2 datasets
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 154 bp overlap
ChIP HCT116 ENCFF540ZXN 272 bp overlap
FOXA1 8 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 508 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 464 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 524 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 105 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 131 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 467 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 663 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 239 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 559 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 299 bp overlap
ChIP DE DE-FOXA2-1 451 bp overlap
ChIP DE DE-FOXA2-2 560 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 295 bp overlap
GATA2 6 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 252 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 252 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 269 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 239 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 347 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 205 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF437NQS 371 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 141 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 578 bp overlap
ChIP DE DE-GATA4-2 676 bp overlap
ChIP KATO-III GSE51705.GATA4.KATO-III 364 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 352 bp overlap
ChIP foregut GSE117136.GATA4.foregut 451 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 602 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 420 bp overlap
GATA6 21 datasets
ChIP AGS GSE51705.GATA6.AGS 352 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 224 bp overlap
ChIP DE DE-GATA6-1 580 bp overlap
ChIP DE DE-GATA6-2 676 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 473 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 510 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 377 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 543 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 437 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 629 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 465 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 303 bp overlap
ChIP KATO-III GSE51705.GATA6.KATO-III 380 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 528 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 617 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 642 bp overlap
ChIP foregut GSE117136.GATA6.foregut 451 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 273 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 552 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 346 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 465 bp overlap
GRHL2 1 dataset
ChIP OVCA429 GSE71018.GRHL2.OVCA429 129 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 669 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 516 bp overlap
HOXB13 2 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 184 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 57 bp overlap
HSF1 1 dataset
ChIP MCF-10A_HEAT GSE38901.HSF1.MCF-10A_HEAT 148 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 451 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 201 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 365 bp overlap
ChIP MCF-7_E2 GSE102410.JUN.MCF-7_E2 157 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.JUN.MCF-7_Tamoxifen 263 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 119 bp overlap
JUNB 2 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 567 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 135 bp overlap
JUND 5 datasets
ChIP Calu-3 GSE85401.JUND.Calu-3 93 bp overlap
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 151 bp overlap
ChIP HCT116 ENCFF748ZQX 260 bp overlap
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 191 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 120 bp overlap
KDM1A 3 datasets
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 343 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 371 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 268 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 274 bp overlap
KLF4 3 datasets
ChIP PDAC GSE64557.KLF4.PDAC 672 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 146 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 396 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 167 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 667 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 154 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 150 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 445 bp overlap
MYOD1 1 dataset
Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap
NCOA1 2 datasets
ChIP LS180 GSE39277.NCOA1.LS180 122 bp overlap
ChIP LS180_125 GSE39277.NCOA1.LS180_125 145 bp overlap
NCOR1 2 datasets
ChIP LS180 GSE39277.NCOR1.LS180 131 bp overlap
ChIP LS180_125 GSE39277.NCOR1.LS180_125 221 bp overlap
NELFE 1 dataset
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 171 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 159 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 425 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 164 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 219 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 348 bp overlap
POLR2A 2 datasets
ChIP stomach ENCFF607ZPU 212 bp overlap
ChIP stomach ENCFF820WZN 293 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 74 bp overlap
Ptf1A 1 dataset
Motif DE_48h DE_48h-Ptf1A_MA1620.2 8 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 676 bp overlap
RELA 2 datasets
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 322 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 402 bp overlap
REST 1 dataset
ChIP GM12878 ENCSR000BGF.REST.GM12878 63 bp overlap
SCRT1 1 dataset
Motif DE_48h DE_48h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_48h DE_48h-SCRT2_MA0744.3 10 bp overlap
SIX1 1 dataset
Motif DE_48h DE_48h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 521 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 188 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 137 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 268 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 125 bp overlap
SMC1A 2 datasets
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 148 bp overlap
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 172 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 548 bp overlap
SNAI1 1 dataset
Motif DE_48h DE_48h-SNAI1_MA1558.2 7 bp overlap
SNAI2 4 datasets
Motif DE_48h DE_48h-SNAI2_MA0745.3 8 bp overlap
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 386 bp overlap
ChIP keratinocyte_LacZ_DIFF GSE55421.SNAI2.keratinocyte_LacZ_DIFF 280 bp overlap
ChIP keratinocyte_SHCTR GSE55421.SNAI2.keratinocyte_SHCTR 182 bp overlap
SNAI3 1 dataset
Motif DE_48h DE_48h-SNAI3_MA1559.2 9 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 368 bp overlap
SOX4 1 dataset
ChIP HCC1954 GSE104760.SOX4.HCC1954 175 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 240 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 294 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 294 bp overlap
STAT3 2 datasets
ChIP HCC1143_EtOH GSE85579.STAT3.HCC1143_EtOH 137 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 111 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 306 bp overlap
Six4 1 dataset
Motif DE_48h DE_48h-Six4_MA2001.2 7 bp overlap
TCF12 1 dataset
Motif DE_48h DE_48h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_48h DE_48h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_48h DE_48h-TCF4_MA0830.3 8 bp overlap
TCF7L2 1 dataset
ChIP LNCaP GSE51621.TCF7L2.LNCaP 194 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 463 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 397 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 468 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 72 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 109 bp overlap
YY1AP1 1 dataset
ChIP MCF-10A_DOX GSE115787.YY1AP1.MCF-10A_DOX 112 bp overlap
ZC3H8 1 dataset
ChIP HCT-116 GSE47938.ZC3H8.HCT-116 449 bp overlap
ZEB1 2 datasets
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ZNF24 1 dataset
ChIP MCF-7 ENCSR503VTG.ZNF24.MCF-7 299 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 401 bp overlap