chr10 : 60,990,747 – 60,991,133
386 bp 83 TFs 1 linked gene
This 386 bp open chromatin element is linked to LINC00845 and is bound by 83 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC00845 10.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:60,985,747 – 60,996,133
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 263 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 183 bp overlap
ChIP NGP GSE134626.ARID1A.NGP 251 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 311 bp overlap
ChIP K562 ENCFF938UXQ 252 bp overlap
ATF2 2 datasets
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 95 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 255 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 386 bp overlap
ATF4 1 dataset
ChIP K562 ENCFF674KTF 139 bp overlap
ATF7 1 dataset
ChIP HepG2 ENCFF470FKK 77 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 272 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 155 bp overlap
BRD4 2 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 386 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 235 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 314 bp overlap
ChIP K562 ENCFF673OEZ 224 bp overlap
CDX2 2 datasets
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 179 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 137 bp overlap
CEBPA 1 dataset
ChIP SGBS GSE41629.CEBPA.SGBS 96 bp overlap
CEBPB 1 dataset
ChIP HeLa-S3 ENCFF722WEG 207 bp overlap
CHAMP1 2 datasets
ChIP K-562 ENCSR315NNL.CHAMP1.K-562 160 bp overlap
ChIP K-562 ENCSR065XVO.CHAMP1.K-562 208 bp overlap
CHD2 1 dataset
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 134 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 246 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 245 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 325 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 306 bp overlap
ChIP K562 ENCFF775HUO 224 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 205 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 385 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 243 bp overlap
FOS 3 datasets
ChIP HeLa-S3 ENCFF829XRF 220 bp overlap
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 234 bp overlap
ChIP K-562 ENCSR000DKB.FOS.K-562 123 bp overlap
FOSL1 3 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 368 bp overlap
ChIP K562 ENCFF455MKD 274 bp overlap
ChIP K562 ENCFF455MKD 386 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 264 bp overlap
FOXM1 1 dataset
ChIP K-562 ENCSR429QPP.FOXM1.K-562 240 bp overlap
GATA1 4 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 134 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 224 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 157 bp overlap
ChIP K562 ENCFF094CMK 189 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 163 bp overlap
GATA4 6 datasets
ChIP A-549 GSE85002.GATA4.A-549 216 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 359 bp overlap
ChIP DE DE-GATA4-1 386 bp overlap
ChIP DE DE-GATA4-2 386 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 386 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 262 bp overlap
GATA6 6 datasets
ChIP AGS GSE51705.GATA6.AGS 357 bp overlap
ChIP DE DE-GATA6-1 386 bp overlap
ChIP DE DE-GATA6-2 386 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 386 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 177 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 386 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 148 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 211 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 265 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 240 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 223 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 330 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 335 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 330 bp overlap
ChIP HEK293 ENCFF252CFL 296 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 279 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 292 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 386 bp overlap
ChIP HeLa-S3 ENCFF668QVP 246 bp overlap
ChIP HeLa-S3 ENCSR000EDG.JUN.HeLa-S3 169 bp overlap
ChIP K-562 ENCSR000FAH.JUN.K-562 123 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 176 bp overlap
JUND 4 datasets
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 167 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 171 bp overlap
ChIP K562 ENCFF336RCR 321 bp overlap
ChIP K562 ENCFF830LVJ 237 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 282 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 313 bp overlap
ChIP K562 ENCFF320GSD 302 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 241 bp overlap
ChIP K562 ENCFF731XJJ 344 bp overlap
MYC 2 datasets
ChIP HeLa-S3 ENCFF448AMU 290 bp overlap
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 265 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 189 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 243 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF788MPU 346 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 353 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 126 bp overlap
NFE2L2 1 dataset
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 181 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 386 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 61 bp overlap
PKNOX1 1 dataset
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 353 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 149 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 264 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 171 bp overlap
ChIP HGrC1_EV-TGF GSE138496.SMAD2-3.HGrC1_EV-TGF 289 bp overlap
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 105 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 386 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 386 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 386 bp overlap
SMAD3 4 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 124 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 255 bp overlap
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 222 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 181 bp overlap
SMAD4 4 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 150 bp overlap
ChIP HGrC1_EV-TGF GSE138496.SMAD4.HGrC1_EV-TGF 193 bp overlap
ChIP HGrC1_WT-TGF GSE138496.SMAD4.HGrC1_WT-TGF 306 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 304 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 327 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 299 bp overlap
ChIP K562 ENCFF506JCB 386 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 276 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 232 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 293 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 386 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 341 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 133 bp overlap
TAL1 3 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 285 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 231 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 135 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 297 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 210 bp overlap
ChIP SK-N-SH ENCFF147AHB 307 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 110 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 170 bp overlap
TRIM24 4 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 386 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 275 bp overlap
ChIP K562 ENCFF284DKY 294 bp overlap
ChIP K562 ENCFF616RIL 147 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF265CEM 386 bp overlap
VDR 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 199 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 242 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 138 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 386 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 251 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 337 bp overlap
ZNF184 1 dataset
ChIP K-562 ENCSR621ATC.ZNF184.K-562 303 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 240 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 325 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 205 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 386 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 321 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 225 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 155 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 339 bp overlap
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