chr10 : 46,549,327 46,549,694
367 bp 94 TFs 1 linked gene
This 367 bp open chromatin element is linked to GPRIN2 and is bound by 94 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GPRIN2 7.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:46,544,327 – 46,554,694
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 173 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 179 bp overlap
AR 2 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 140 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 252 bp overlap
ARNT 1 dataset
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 179 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 367 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 147 bp overlap
BRD4 6 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 367 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 83 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 276 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 367 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 367 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 367 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 206 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CDK9 2 datasets
ChIP HCT-116 GSE72622.CDK9.HCT-116 220 bp overlap
ChIP HCT-116 GSE72622.CDK9.HCT-116 91 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 100 bp overlap
CEBPG 1 dataset
ChIP K562 ENCFF651CMK 88 bp overlap
CHD1 2 datasets
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 358 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 305 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_5 GSE62428.CHD8.T-47D_ETOH_5 65 bp overlap
CREB1 1 dataset
ChIP K562 ENCFF786DGQ 142 bp overlap
CTCF 79 datasets
ChIP 22Rv1 ENCFF466OXN 367 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 292 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 273 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 241 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 173 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 203 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 367 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 181 bp overlap
ChIP DND-41 ENCFF913MRA 234 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 163 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 197 bp overlap
ChIP DU145 GSE121021.CTCF.DU145 188 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 144 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 154 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 124 bp overlap
ChIP GM23338 ENCFF531QOI 168 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF414GZI 177 bp overlap
ChIP H1 ENCFF764RHO 206 bp overlap
ChIP H54 ENCFF255TVO 187 bp overlap
ChIP H9 ENCFF152GTF 327 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 254 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 242 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 204 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 164 bp overlap
ChIP HCT116 ENCFF003KHP 296 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 138 bp overlap
ChIP HFFc6 ENCFF005CJI 318 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 118 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 345 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 162 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 162 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 225 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 167 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 103 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 253 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 225 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 146 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 151 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 127 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 174 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 226 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 271 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 255 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 220 bp overlap
ChIP K562 ENCFF111MGE 238 bp overlap
ChIP KB_5Z GSE134435.CTCF.KB_5Z 122 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 205 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 193 bp overlap
ChIP MCF-7 ENCFF414SZG 189 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 159 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 127 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 192 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 131 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 272 bp overlap
ChIP NB4 ENCFF155DNY 184 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 211 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 189 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 135 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 337 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 334 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 325 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 367 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 145 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 138 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 137 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 101 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 229 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 118 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 151 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 153 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 165 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 153 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 153 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 367 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 134 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 174 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 105 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 142 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 235 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 182 bp overlap
ERG 3 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 106 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 239 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 263 bp overlap
ESR1 5 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 367 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 224 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 314 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 219 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 113 bp overlap
EZH2 2 datasets
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 367 bp overlap
ChIP SU-DHL-6_DMSO GSE134136.EZH2.SU-DHL-6_DMSO 366 bp overlap
FIP1L1 1 dataset
ChIP K-562 GSE120104.FIP1L1.K-562 239 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 367 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 304 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 367 bp overlap
FOXP1 1 dataset
ChIP K562 ENCFF954SDY 181 bp overlap
GTF2F1 2 datasets
ChIP K-562 GSE120104.GTF2F1.K-562 213 bp overlap
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 205 bp overlap
HEXIM1 2 datasets
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 157 bp overlap
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 159 bp overlap
HIC2 1 dataset
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 174 bp overlap
HIVEP1 2 datasets
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 179 bp overlap
ChIP K562 ENCFF983WKN 162 bp overlap
HOXB5 1 dataset
ChIP A549 ENCFF891VDO 254 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 215 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 227 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 165 bp overlap
JUND 1 dataset
ChIP A-549 ENCSR000BRF.JUND.A-549 154 bp overlap
KMT2A 1 dataset
ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 249 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 146 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 367 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 354 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 161 bp overlap
NFKB1 2 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 226 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 367 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 280 bp overlap
NR5A2 1 dataset
ChIP A549 ENCFF834RVE 190 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 367 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 367 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 367 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 367 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 322 bp overlap
PBX3 1 dataset
ChIP A549 ENCFF277EQG 119 bp overlap
POU2F1 3 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 290 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 188 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 120 bp overlap
POU5F1 3 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 178 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 90 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 367 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 367 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 205 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 191 bp overlap
ChIP H1 ENCFF967OJF 206 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 325 bp overlap
RARB 1 dataset
Motif ES_0h ES_0h-RARB_MA1552.2 13 bp overlap
RARG 1 dataset
Motif ES_0h ES_0h-RARG_MA1553.2 13 bp overlap
RBM14 1 dataset
ChIP K-562 ENCSR423FCW.RBM14.K-562 125 bp overlap
RELA 4 datasets
ChIP HEK293 GSE89017.RELA.HEK293 299 bp overlap
ChIP HEK293_15min GSE89017.RELA.HEK293_15min 287 bp overlap
ChIP HEK293_30_min GSE89017.RELA.HEK293_30_min 315 bp overlap
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 134 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 367 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 367 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 113 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 367 bp overlap
RXRB 1 dataset
Motif ES_0h ES_0h-RXRB_MA1555.1 14 bp overlap
RXRG 1 dataset
Motif ES_0h ES_0h-RXRG_MA1556.1 14 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 246 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 187 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 367 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 345 bp overlap
SRSF3 2 datasets
ChIP K-562 GSE120104.SRSF3.K-562 91 bp overlap
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 77 bp overlap
STAG1 2 datasets
ChIP K-562 ENCSR153HNT.STAG1.K-562 130 bp overlap
ChIP K562 ENCFF674HJF 249 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 367 bp overlap
SUZ12 2 datasets
ChIP K-562 ENCSR000AUC.SUZ12.K-562 296 bp overlap
ChIP K562 ENCFF397TBJ 311 bp overlap
TAF15 1 dataset
ChIP HepG2 ENCFF116QSW 310 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 213 bp overlap
TARDBP 2 datasets
ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 158 bp overlap
ChIP Hep-G2 GSE120104.TARDBP.Hep-G2 151 bp overlap
TCF12 1 dataset
ChIP ME-1 GSE46044.TCF12.ME-1 217 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF584VSB 197 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 367 bp overlap
TP53 1 dataset
ChIP HCT-116_IR GSE60267.TP53.HCT-116_IR 367 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 189 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 196 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 235 bp overlap
Thap11 1 dataset
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
USF1 1 dataset
ChIP K562 ENCFF202SFC 89 bp overlap
USF2 1 dataset
ChIP K-562 GSE111469.USF2.K-562 214 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 367 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 367 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 344 bp overlap
ZFP36 6 datasets
ChIP A-549 ENCSR294JWV.ZFP36.A-549 184 bp overlap
ChIP A549 ENCFF505LUC 196 bp overlap
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 117 bp overlap
ChIP HeLa-S3 ENCSR184MFH.ZFP36.HeLa-S3 143 bp overlap
ChIP K-562 ENCSR776CYN.ZFP36.K-562 306 bp overlap
ChIP K562 ENCFF255RZG 211 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 165 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 173 bp overlap