chr10 : 46,053,610 46,054,514
904 bp 85 TFs 1 linked gene
This 904 bp open chromatin element is linked to MSMB and is bound by 85 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MSMB 5.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:46,048,610 – 46,059,514
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 186 bp overlap
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 199 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 603 bp overlap
ChIP K562 ENCFF938UXQ 351 bp overlap
ARID4A 1 dataset
ChIP HepG2 ENCFF142DIE 578 bp overlap
BRD3 2 datasets
ChIP H-1_DE GSE126661.BRD3.H-1_DE 82 bp overlap
ChIP H-1_DE GSE126661.BRD3.H-1_DE 184 bp overlap
BRD4 3 datasets
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 215 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 145 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 179 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 717 bp overlap
ChIP K562 ENCFF673OEZ 332 bp overlap
CBFB 1 dataset
ChIP Hep-G2 ENCSR479RZV.CBFB.Hep-G2 147 bp overlap
CTCF 2 datasets
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 95 bp overlap
ChIP K562 ENCFF400DFR 109 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 296 bp overlap
DPF2 2 datasets
ChIP K562 ENCFF775HUO 291 bp overlap
ChIP K562 ENCFF775HUO 526 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 105 bp overlap
E2F5 1 dataset
ChIP K562 ENCFF688PUB 666 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 146 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 317 bp overlap
ESR1 19 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 210 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 176 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 199 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 198 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 117 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 219 bp overlap
ChIP MCF-7_E2 ERP000380.ESR1.MCF-7_E2 164 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 253 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 230 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 256 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 234 bp overlap
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 234 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 267 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 145 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 169 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 217 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 185 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 282 bp overlap
ChIP MDA-MB-134-VI_FI GSE109103.ESR1.MDA-MB-134-VI_FI 276 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 272 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 207 bp overlap
ESRRA 3 datasets
ChIP HepG2 ENCFF033DVS 312 bp overlap
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 135 bp overlap
ChIP K562 ENCFF968PEP 235 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 737 bp overlap
FOXA1 3 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 178 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 154 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 245 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 581 bp overlap
ChIP DE DE-FOXA2-2 579 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 239 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 66 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 68 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
GATA2 5 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 304 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 99 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
ChIP K562 ENCFF830LLA 577 bp overlap
ChIP K562 ENCFF830LLA 545 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 96 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 86 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 772 bp overlap
ChIP DE DE-GATA4-2 784 bp overlap
ChIP foregut GSE117136.GATA4.foregut 541 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 382 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 266 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 660 bp overlap
ChIP DE DE-GATA6-2 725 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 408 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 618 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 573 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 595 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 503 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 450 bp overlap
ChIP foregut GSE117136.GATA6.foregut 513 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 295 bp overlap
GFI1 1 dataset
ChIP HepG2 ENCFF472INF 131 bp overlap
HDAC1 2 datasets
ChIP K562 ENCFF928TKZ 457 bp overlap
ChIP K562 ENCFF968WBH 198 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 196 bp overlap
ChIP K562 ENCFF744ALD 217 bp overlap
ChIP K562 ENCFF919OMP 511 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 302 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 170 bp overlap
JUND 1 dataset
ChIP K562 ENCFF830LVJ 281 bp overlap
KDM1A 5 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 238 bp overlap
ChIP K562 ENCFF128TYE 155 bp overlap
ChIP K562 ENCFF128TYE 461 bp overlap
ChIP K562 ENCFF133OLU 127 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 278 bp overlap
KLF6 2 datasets
ChIP K-562 ENCSR297CGF.KLF6.K-562 237 bp overlap
ChIP K562 ENCFF948QSP 291 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 112 bp overlap
LDB1 2 datasets
ChIP K-562 GSE142227.LDB1.K-562 118 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 157 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 131 bp overlap
MED1 1 dataset
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 170 bp overlap
MEIS2 1 dataset
ChIP K562 ENCFF320GSD 155 bp overlap
MTA1 1 dataset
ChIP K562 ENCFF230ZKA 445 bp overlap
MTA2 1 dataset
ChIP K562 ENCFF880VZB 341 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 756 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF866HRM 445 bp overlap
NFYB 1 dataset
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 73 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 889 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF674RQA 457 bp overlap
NRF1 3 datasets
ChIP K-562 ENCSR837EYC.NRF1.K-562 141 bp overlap
ChIP K562 ENCFF130SGK 298 bp overlap
ChIP K562 ENCFF689EWI 142 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 193 bp overlap
PAXIP1 1 dataset
ChIP HepG2 ENCFF526NOJ 318 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 295 bp overlap
ChIP K562 ENCFF236IUS 194 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 418 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 176 bp overlap
PTTG1 1 dataset
ChIP K562 ENCFF017KRM 175 bp overlap
RAD21 1 dataset
ChIP K562 ENCFF066JWO 369 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 297 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 362 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 855 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 342 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 511 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 389 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 624 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 582 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 616 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 649 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 278 bp overlap
ChIP K562 ENCFF506JCB 179 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 268 bp overlap
SMARCE1 1 dataset
ChIP K562 ENCFF690CFF 517 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 373 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 582 bp overlap
SOX6 2 datasets
ChIP HepG2 ENCFF767OCK 95 bp overlap
ChIP K562 ENCFF059YCJ 243 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 121 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 132 bp overlap
TAL1 3 datasets
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 152 bp overlap
ChIP K562 ENCFF620GMX 196 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
TCF12 1 dataset
ChIP K562 ENCFF931DJY 391 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 365 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 118 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 117 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 145 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 129 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 810 bp overlap
ZBTB7A 3 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 166 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 69 bp overlap
ChIP K562 ENCFF579ZGM 214 bp overlap
ZEB2 3 datasets
ChIP K562 ENCFF795CMH 477 bp overlap
ChIP K562 ENCFF975RXS 461 bp overlap
ChIP K562 ENCFF975RXS 461 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 403 bp overlap
ZNF343 1 dataset
ChIP HepG2 ENCFF003KCM 426 bp overlap
ZNF652 2 datasets
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 311 bp overlap
ChIP HepG2 ENCFF331VPZ 345 bp overlap