chr1 : 156,859,560 156,859,733
173 bp 81 TFs 1 linked gene
This 173 bp open chromatin element is linked to NTRK1 and is bound by 81 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NTRK1 1.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:156,854,560 – 156,864,733
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 112 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 56 bp overlap
AR 2 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 163 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 173 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 173 bp overlap
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 173 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 173 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 173 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 72 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 173 bp overlap
BRD4 6 datasets
ChIP HCC1937 GSE124748.BRD4.HCC1937 70 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 63 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 173 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 134 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 173 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 173 bp overlap
CHD1 2 datasets
ChIP K-562 ENCSR000AQD.CHD1.K-562 115 bp overlap
ChIP K562 ENCFF118VJV 143 bp overlap
CTCF 28 datasets
ChIP 22Rv1 ENCFF466OXN 148 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 173 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 173 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 66 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 83 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 173 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 173 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 114 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 173 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 138 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 70 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 122 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 52 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 163 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 115 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 141 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 66 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 113 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 105 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 114 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 103 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 173 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 84 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 173 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 173 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 173 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 173 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 173 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 81 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 156 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 74 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 83 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 94 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 63 bp overlap
EZH2 38 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 173 bp overlap
ChIP A673 ENCFF790MVL 77 bp overlap
ChIP B cell ENCFF803EMO 173 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 142 bp overlap
ChIP DOHH2 ENCFF528GDC 144 bp overlap
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 173 bp overlap
ChIP GM23338 ENCFF613YON 173 bp overlap
ChIP H1 ENCFF232NZA 173 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 173 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 173 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 173 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 173 bp overlap
ChIP HepG2 ENCFF912EIW 173 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 54 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 68 bp overlap
ChIP MM.1S ENCFF966SYG 173 bp overlap
ChIP MM.1S ENCFF966SYG 156 bp overlap
ChIP PC-3 ENCFF855OUB 152 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 173 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 60 bp overlap
ChIP astrocyte ENCFF365JTP 173 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 173 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 173 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 121 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 63 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 173 bp overlap
ChIP fibroblast of lung ENCFF479BAW 173 bp overlap
ChIP hESC GSE113817.EZH2.hESC 91 bp overlap
ChIP keratinocyte ENCFF070STK 173 bp overlap
ChIP keratinocyte ENCFF070STK 173 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 173 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 152 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 173 bp overlap
ChIP neural progenitor cell ENCFF472NFV 173 bp overlap
ChIP neural progenitor cell ENCFF472NFV 81 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 173 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 173 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 104 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 110 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 62 bp overlap
GATA2 1 dataset
ChIP SK-N-SH ENCFF764OZD 105 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR000AQF.HDAC1.K-562 173 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 87 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 146 bp overlap
ChIP K-562 ENCSR000AQG.HDAC2.K-562 131 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 54 bp overlap
HDAC6 2 datasets
ChIP GM12878 ENCFF918SGD 173 bp overlap
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 173 bp overlap
INO80 1 dataset
ChIP Hep-G2 GSE107730.INO80.Hep-G2 173 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 66 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 126 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 173 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 173 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 101 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 173 bp overlap
ChIP H1 ENCFF078LED 172 bp overlap
KDM5B 1 dataset
ChIP K-562 ENCSR000AQA.KDM5B.K-562 113 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 52 bp overlap
MED1 2 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 113 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 173 bp overlap
MNX1 1 dataset
ChIP HepG2 ENCFF938KYA 173 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR914NEI.MTA3.K-562 173 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 173 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 173 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 55 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 97 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 142 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 50 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 56 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF902UIK 165 bp overlap
OLIG2 5 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 173 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 173 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 173 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 89 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 173 bp overlap
PCBP1 1 dataset
ChIP K562 ENCFF121LOV 173 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 173 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF648YPL 168 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 173 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 173 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 107 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 128 bp overlap
RBBP5 3 datasets
ChIP K562 ENCFF070CVK 173 bp overlap
ChIP K562 ENCFF070CVK 173 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 57 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 173 bp overlap
REST 1 dataset
ChIP CD4 GSE49570.REST.CD4 77 bp overlap
RNF2 3 datasets
ChIP K-562 ENCSR138FUZ.RNF2.K-562 61 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 173 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 90 bp overlap
SAP30 2 datasets
ChIP K-562 ENCSR000AQJ.SAP30.K-562 59 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 173 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 118 bp overlap
SMARCA4 3 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 173 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 163 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 63 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 173 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 173 bp overlap
SMC1 2 datasets
ChIP HCT-116 GSE131606.SMC1.HCT-116 173 bp overlap
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 173 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 57 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 153 bp overlap
SUZ12 10 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 173 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 173 bp overlap
ChIP H1 ENCFF881NFR 173 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 156 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 173 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 173 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 173 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 173 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 173 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 129 bp overlap
TARDBP 2 datasets
ChIP K-562 GSE120104.TARDBP.K-562 124 bp overlap
ChIP K-562 ENCSR429XTR.TARDBP.K-562 109 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 154 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 77 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 73 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 173 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 98 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 110 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 173 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 78 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 64 bp overlap
ZFX 2 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 173 bp overlap
ChIP K562 ENCFF536AJO 173 bp overlap
ZNF547 1 dataset
ChIP HepG2 ENCFF834XWI 142 bp overlap