chr6 : 118,378,037 118,378,380
343 bp 103 TFs 0 linked genes
This 343 bp open chromatin element has no linked target genes and is bound by 103 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:118,373,037 – 118,383,380
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP GSE148358.AR.VCaP 174 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 178 bp overlap
ASCL1 5 datasets
ChIP NCI-H128 GSE69394.ASCL1.NCI-H128 301 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 268 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 297 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 333 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 182 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 343 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 343 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 343 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 343 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 173 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 111 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 299 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 223 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 281 bp overlap
BRD4 8 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 84 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 203 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 343 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 327 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 343 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 297 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 249 bp overlap
ChIP thyroid-cancer GSE114068.BRD4.thyroid-cancer 265 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 154 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 53 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 131 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 310 bp overlap
CTCF 9 datasets
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 120 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 181 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR353DFU.CTCF.esophagus_muscularis-mucosa 259 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 330 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 327 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 288 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 233 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 187 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 173 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 166 bp overlap
Cebpa 10 datasets
ChIP BLaER1 ENCFF031ISE 126 bp overlap
ChIP BLaER1 ENCFF093OYK 104 bp overlap
ChIP BLaER1 ENCFF140EYR 102 bp overlap
ChIP BLaER1 ENCFF274GAT 94 bp overlap
ChIP BLaER1 ENCFF335XTP 59 bp overlap
ChIP BLaER1 ENCFF341QPD 183 bp overlap
ChIP BLaER1 ENCFF364PUR 160 bp overlap
ChIP BLaER1 ENCFF680YXW 96 bp overlap
ChIP BLaER1 ENCFF844FIP 80 bp overlap
ChIP BLaER1 ENCFF896HSY 93 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 122 bp overlap
ChIP K562 ENCFF006PJY 165 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 146 bp overlap
EGR4 1 dataset
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 303 bp overlap
ESR1 14 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 109 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 320 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 250 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 331 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 291 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 195 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 343 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 163 bp overlap
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 119 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 184 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 290 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 343 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 343 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 343 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 204 bp overlap
ETS1 3 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 248 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 342 bp overlap
ChIP THP-6_shEts1 GSE138516.ETS1.THP-6_shEts1 343 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 343 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 230 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 166 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 343 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 132 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
KDM1A 2 datasets
ChIP H1 ENCFF696SGD 343 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 186 bp overlap
KLF4 1 dataset
ChIP hiPSC GSE56567.KLF4.hiPSC 157 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 280 bp overlap
KMT2A 1 dataset
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 343 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 262 bp overlap
MAX 3 datasets
ChIP NCI-H128 GSE41105.MAX.NCI-H128 343 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 343 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 343 bp overlap
MED1 2 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 303 bp overlap
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 215 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 215 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 209 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 310 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 239 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 240 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 343 bp overlap
MYOD1 5 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 179 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 168 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 155 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 136 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 120 bp overlap
NANOG 3 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 292 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 212 bp overlap
NEUROD1 1 dataset
ChIP NCI-H524 GSE69394.NEUROD1.NCI-H524 183 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 214 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 332 bp overlap
NKX6-1 1 dataset
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 1 dataset
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 343 bp overlap
NR3C1 2 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 176 bp overlap
ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 106 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 113 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 290 bp overlap
ChIP islet ERP001456.PDX1.islet 226 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap
POU4F2 2 datasets
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 116 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 343 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 264 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 292 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 343 bp overlap
RFX4 1 dataset
Motif DE_12h DE_12h-RFX4_MA0799.3 13 bp overlap
RFX7 1 dataset
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 340 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 308 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMARCA4 7 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 343 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 343 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 247 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 195 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 198 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 110 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 315 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 275 bp overlap
SOX2 3 datasets
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 142 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 300 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 208 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 186 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 317 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 237 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 227 bp overlap
TAL1 3 datasets
ChIP CCRF-CEM GSE33850.TAL1.CCRF-CEM 127 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 315 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 163 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 114 bp overlap
TCF12 3 datasets
ChIP CCRF-CEM GSE33850.TCF12.CCRF-CEM 239 bp overlap
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 341 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 343 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA1-mut GSE113909.TCF7.breast-organoid_BRCA1-mut 216 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1575.2 17 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 264 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 273 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 324 bp overlap
ZBTB14 1 dataset
Motif DE_12h DE_12h-ZBTB14_MA1650.2 8 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 208 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 267 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 260 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 343 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 343 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 199 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 172 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap