chr6 : 87,333,036 – 87,333,449
413 bp 111 TFs 1 linked gene
This 413 bp open chromatin element is linked to GJB7 and is bound by 111 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GJB7 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:87,328,036 – 87,338,449
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
ARNT::HIF1A 1 dataset
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Ahr::Arnt 1 dataset
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Arid3b 2 datasets
Motif DE_12h DE_12h-Arid3b_MA0601.2 7 bp overlap
Motif DE_24h DE_24h-Arid3b_MA0601.2 7 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 285 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 400 bp overlap
CREB3L1 2 datasets
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
Motif DE_24h DE_24h-CREB3L1_MA0839.2 13 bp overlap
CTCF 2 datasets
ChIP heart ENCSR778ZPK.CTCF.heart 92 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 80 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 355 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 395 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_24h DE_24h-DUX4_MA0468.1 11 bp overlap
E2F5 1 dataset
ChIP K562 ENCFF688PUB 272 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 344 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 156 bp overlap
EBF1 2 datasets
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
Motif DE_24h DE_24h-EBF1_MA0154.5 11 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 319 bp overlap
ELK1::HOXB13 2 datasets
Motif DE_12h DE_12h-ELK1HOXB13_MA1932.2 15 bp overlap
Motif DE_24h DE_24h-ELK1HOXB13_MA1932.2 15 bp overlap
ERF 1 dataset
Motif DE_12h DE_12h-ERF_MA0760.2 9 bp overlap
ERF::FOXI1 1 dataset
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 1 dataset
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
ERF::HOXB13 2 datasets
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
Motif DE_24h DE_24h-ERFHOXB13_MA1937.2 13 bp overlap
ESR1 2 datasets
Motif DE_12h DE_12h-ESR1_MA0112.4 15 bp overlap
Motif DE_24h DE_24h-ESR1_MA0112.4 15 bp overlap
ESR2 2 datasets
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
Motif DE_24h DE_24h-ESR2_MA0258.2 15 bp overlap
ETS1 1 dataset
Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap
ETS2 1 dataset
Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV2::FOXI1 3 datasets
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_24h DE_24h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::DRGX 2 datasets
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
Motif DE_24h DE_24h-ETV5DRGX_MA1944.2 12 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Ebf4 2 datasets
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Motif DE_24h DE_24h-Ebf4_MA2122.1 11 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FLI1::DRGX 2 datasets
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
Motif DE_24h DE_24h-FLI1DRGX_MA1949.2 14 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 315 bp overlap
GLIS3 3 datasets
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
Motif DE_24h DE_24h-GLIS3_MA0737.1 14 bp overlap
ChIP H9_plus GSE109562.GLIS3.H9_plus 236 bp overlap
Gfi1B 1 dataset
Motif DE_24h DE_24h-Gfi1B_MA0483.2 10 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 212 bp overlap
HOXC12 2 datasets
Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap
Motif DE_24h DE_24h-HOXC12_MA0906.2 10 bp overlap
HOXD11 2 datasets
Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap
Motif DE_24h DE_24h-HOXD11_MA0908.2 9 bp overlap
Hand1::Tcf3 2 datasets
Motif DE_12h DE_12h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_24h DE_24h-Hand1Tcf3_MA0092.2 9 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 162 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 5 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 322 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 263 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 413 bp overlap
ChIP K562 ENCFF320EQC 413 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 270 bp overlap
ChIP K562 ENCFF110LJS 333 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 217 bp overlap
ChIP K562 ENCFF140CEX 413 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 241 bp overlap
MXI1 4 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
MYC 1 dataset
ChIP K562 ENCFF988ZRU 399 bp overlap
MYOG 1 dataset
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 219 bp overlap
NR1D2 2 datasets
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
Motif DE_24h DE_24h-NR1D2_MA1532.2 15 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 5 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
ChIP K562 ENCFF750AXF 413 bp overlap
ChIP K562 ENCFF750AXF 198 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 161 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 87 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nr2f6 1 dataset
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 283 bp overlap
PPARA::RXRA 1 dataset
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
PPARG 1 dataset
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Prdm5 2 datasets
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
Motif DE_24h DE_24h-Prdm5_MA1999.2 11 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
REST 2 datasets
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif DE_24h DE_24h-REST_MA0138.3 20 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap
RREB1 2 datasets
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
Motif DE_24h DE_24h-RREB1_MA0073.2 19 bp overlap
RUNX3 1 dataset
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rfx6 2 datasets
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Motif DE_24h DE_24h-Rfx6_MA1724.2 9 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SIX1 2 datasets
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
Motif DE_24h DE_24h-SIX1_MA1118.2 9 bp overlap
SIX2 2 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
Motif DE_24h DE_24h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 338 bp overlap
SMAD4 2 datasets
ChIP K562 ENCFF628RBP 372 bp overlap
ChIP K562 ENCFF628RBP 374 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 4 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
Six4 1 dataset
Motif DE_24h DE_24h-Six4_MA2001.2 7 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
TEAD1 2 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
Motif DE_24h DE_24h-TEAD1_MA0090.4 9 bp overlap
TFAP4 2 datasets
Motif DE_12h DE_12h-TFAP4_MA1570.1 10 bp overlap
Motif DE_24h DE_24h-TFAP4_MA1570.1 10 bp overlap
TFDP1 2 datasets
ChIP K562 ENCFF794ZXJ 339 bp overlap
ChIP K562 ENCFF794ZXJ 135 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
USF1 4 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif DE_24h DE_24h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 156 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 323 bp overlap
ZBTB24 2 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
Motif DE_24h DE_24h-ZBTB24_MA2330.1 10 bp overlap
ZKSCAN5 1 dataset
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF140 2 datasets
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
Motif DE_24h DE_24h-ZNF140_MA1589.2 19 bp overlap
ZNF16 2 datasets
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
Motif DE_24h DE_24h-ZNF16_MA1654.2 21 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 128 bp overlap
ZNF257 1 dataset
ChIP K-562 ENCSR492FKD.ZNF257.K-562 202 bp overlap
ZNF274 2 datasets
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
Motif DE_24h DE_24h-ZNF274_MA1592.2 12 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_24h DE_24h-ZNF354C_MA0130.1 6 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 98 bp overlap
ZNF558 2 datasets
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
Motif DE_24h DE_24h-ZNF558_MA2335.1 29 bp overlap
ZNF582 2 datasets
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
Motif DE_24h DE_24h-ZNF582_MA1983.2 19 bp overlap
ZNF707 1 dataset
Motif DE_24h DE_24h-ZNF707_MA1715.1 15 bp overlap
ZNF740 2 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif DE_24h DE_24h-ZNF740_MA0753.3 10 bp overlap
ZNF816 2 datasets
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Motif DE_24h DE_24h-ZNF816_MA1719.2 15 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
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