chr5 : 151,590,936 151,591,543
607 bp 83 TFs 5 linked genes
This 607 bp open chromatin element is linked to 5 target genes and is bound by 83 transcription factors.
Linked Genes
5 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
FAT2 at TSS At TSS Proximity
SPARC 95.6 kb Distal Multiome
SLC36A1 143.7 kb Distal Multiome
ATOX1 167.3 kb Distal Multiome
G3BP1 180.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:151,585,936 – 151,596,543
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 153 bp overlap
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 191 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 191 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 218 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 100 bp overlap
BRD2 4 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 509 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 607 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 607 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 339 bp overlap
BRD4 4 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 355 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 332 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 388 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 296 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 226 bp overlap
CTCF 3 datasets
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 203 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 311 bp overlap
ChIP skin_lower-leg ENCSR582MTM.CTCF.skin_lower-leg 264 bp overlap
DPRX 1 dataset
Motif ES_0h ES_0h-DPRX_MA1480.2 9 bp overlap
E2F1 1 dataset
ChIP HMEC-1 GSE62425.E2F1.HMEC-1 349 bp overlap
EGR1 1 dataset
ChIP Ishikawa ENCFF550FKT 285 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 408 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 607 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 187 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 424 bp overlap
ERG 1 dataset
ChIP RWPE-1 GSE114241.ERG.RWPE-1 368 bp overlap
ESR1 20 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 185 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 246 bp overlap
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 312 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 398 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 440 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 512 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 416 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 419 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 387 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 348 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 140 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 429 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 437 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 472 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 458 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 84 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 122 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 559 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 577 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 93 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
FOXM1 2 datasets
ChIP Ishikawa ENCFF578VDD 333 bp overlap
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 301 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 136 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HOXB13 1 dataset
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 215 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 178 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 321 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 262 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 417 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 540 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 207 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 142 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
MAX 3 datasets
ChIP Ishikawa ENCFF064TDQ 461 bp overlap
ChIP Ishikawa ENCFF064TDQ 331 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 358 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 264 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 294 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 373 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 153 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 54 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 134 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 194 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 359 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 381 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 308 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 372 bp overlap
POLR2A 9 datasets
ChIP esophagus squamous epithelium ENCFF297FPP 391 bp overlap
ChIP esophagus squamous epithelium ENCFF297FPP 290 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 268 bp overlap
ChIP lower leg skin ENCFF058ULB 377 bp overlap
ChIP lower leg skin ENCFF687RJC 377 bp overlap
ChIP prostate gland ENCFF832RQK 248 bp overlap
ChIP prostate gland ENCFF881OMH 228 bp overlap
ChIP prostate gland ENCFF882MXU 345 bp overlap
ChIP vagina ENCFF384GAB 169 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 287 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 193 bp overlap
PRDM1 2 datasets
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1618.2 9 bp overlap
RAD21 1 dataset
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 128 bp overlap
RBPJ 4 datasets
ChIP HCC1599 GSE116871.RBPJ.HCC1599 265 bp overlap
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 350 bp overlap
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 318 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 379 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 244 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 178 bp overlap
SMARCA4 1 dataset
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
SMC1A 2 datasets
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 286 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 359 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SRF 1 dataset
ChIP Ishikawa ENCFF992QXM 254 bp overlap
STAT3 4 datasets
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 292 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 430 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 262 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 212 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 228 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 458 bp overlap
Stat4 2 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
TAF1 2 datasets
ChIP Ishikawa ENCFF271ZVL 212 bp overlap
ChIP Ishikawa ENCSR000BTO.TAF1.Ishikawa 462 bp overlap
TBP 1 dataset
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 266 bp overlap
TBX5 2 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 387 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 394 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCFF772OTG 255 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 257 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1575.2 17 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 120 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 120 bp overlap
TWIST1 1 dataset
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
USF1 1 dataset
ChIP Ishikawa ENCFF728IEG 231 bp overlap
YY1 1 dataset
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 157 bp overlap
ZBTB33 1 dataset
Motif DE_12h DE_12h-ZBTB33_MA0527.2 10 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 204 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 497 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF416 1 dataset
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap
ZNF417 1 dataset
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap