chr5 : 133,371,397 133,371,952
555 bp 102 TFs 0 linked genes
This 555 bp open chromatin element has no linked target genes and is bound by 102 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:133,366,397 – 133,376,952
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 107 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 110 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 145 bp overlap
BRD4 3 datasets
ChIP HCC1937 GSE124748.BRD4.HCC1937 109 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 555 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 183 bp overlap
CBX3 1 dataset
ChIP HCT116 ENCFF947BOL 431 bp overlap
CDK8 1 dataset
ChIP SW480 GSE53602.CDK8.SW480 180 bp overlap
CEBPB 1 dataset
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 154 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 191 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 350 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 330 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 555 bp overlap
ChIP neural cell ENCFF442QNK 202 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 183 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 107 bp overlap
FOSL1 2 datasets
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 199 bp overlap
ChIP HCT116 ENCFF540ZXN 397 bp overlap
FOSL2 2 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 139 bp overlap
ChIP A549 ENCFF195CES 365 bp overlap
FOXA1 8 datasets
ChIP A-549 ENCSR000BRD.FOXA1.A-549 139 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 154 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 445 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 421 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 555 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 285 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 419 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 497 bp overlap
FOXA2 7 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 354 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 468 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 288 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 462 bp overlap
ChIP DE DE-FOXA2-1 430 bp overlap
ChIP DE DE-FOXA2-2 418 bp overlap
ChIP HepG2 ENCFF570ABM 405 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 269 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 407 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 443 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 555 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 448 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 555 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 555 bp overlap
GLI2 1 dataset
ChIP HEK293 ENCFF700EUN 305 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 212 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 376 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 287 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCFF518OXG 365 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 109 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 306 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 555 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 555 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 358 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 53 bp overlap
JUND 3 datasets
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 250 bp overlap
ChIP HCT116 ENCFF748ZQX 397 bp overlap
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 181 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 170 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 385 bp overlap
MAX 2 datasets
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 191 bp overlap
ChIP HCT116 ENCFF810LEN 431 bp overlap
MED1 2 datasets
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 56 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 136 bp overlap
MGA 2 datasets
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 311 bp overlap
Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 214 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 273 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 242 bp overlap
NIPBL 3 datasets
ChIP GP5D GSE51234.NIPBL.GP5D 317 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 322 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 555 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 309 bp overlap
NKX2-3 1 dataset
Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 223 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 180 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 399 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 378 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 174 bp overlap
PHIP 4 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 264 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 76 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 104 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 159 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 190 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 485 bp overlap
PPARG 4 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 459 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 349 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 129 bp overlap
ChIP OE33 GSE143195.PPARG.OE33 392 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 385 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 305 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 248 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 333 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 180 bp overlap
PROX1 2 datasets
ChIP SW480 GSE60390.PROX1.SW480 217 bp overlap
ChIP SW480 GSE60390.PROX1.SW480 119 bp overlap
RELA 2 datasets
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 58 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 320 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 187 bp overlap
SIN3A 2 datasets
ChIP HCT-116 ENCSR000BSG.SIN3A.HCT-116 157 bp overlap
ChIP HCT116 ENCFF203YBB 528 bp overlap
SMAD2 1 dataset
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 289 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 555 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 555 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 552 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 555 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 555 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 555 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 280 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 389 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 315 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 262 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 187 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 254 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 249 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 282 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 376 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 456 bp overlap
SP1 2 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 229 bp overlap
ChIP HCT116 ENCFF800LBN 404 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 516 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 227 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 507 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 389 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 397 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 216 bp overlap
TBX1 1 dataset
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
TBX5 1 dataset
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
TCF7L2 6 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 246 bp overlap
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 268 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 208 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 241 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 440 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 218 bp overlap
TEAD1 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 131 bp overlap
TEAD4 5 datasets
ChIP HCT-116 ENCSR000BVJ.TEAD4.HCT-116 107 bp overlap
ChIP HCT116 ENCFF526YYD 277 bp overlap
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 203 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 336 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 213 bp overlap
THRA 1 dataset
Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 337 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF265CEM 470 bp overlap
TSHZ1 2 datasets
ChIP HEK293 ENCFF893BGV 92 bp overlap
ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 275 bp overlap
Tbx6 1 dataset
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 243 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 375 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 161 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 144 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 518 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 348 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 394 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 221 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 262 bp overlap
ZNF184 2 datasets
ChIP HEK293 ENCFF221CII 342 bp overlap
ChIP HEK293 ENCSR020UPN.ZNF184.HEK293 219 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 299 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 400 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 339 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 190 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 166 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 504 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 346 bp overlap
ZNF423 1 dataset
ChIP HEK293 ENCFF937QHI 308 bp overlap
ZNF485 1 dataset
ChIP HEK293T GSE78099.ZNF485.HEK293T 169 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 145 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 286 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 268 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 352 bp overlap
ZNF639 2 datasets
ChIP HEK293 ENCFF971ZNH 396 bp overlap
ChIP HEK293 ENCSR080CST.ZNF639.HEK293 237 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 192 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 177 bp overlap