chr5 : 122,354,367 – 122,354,586

219 bp 86 TFs 0 linked genes

This 219 bp open chromatin element has no linked target genes and is bound by 86 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

86 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 219 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 181 bp overlap

Arid5a 1 dataset

Motif DE_12h DE_12h-Arid5a_MA0602.2 8 bp overlap

BCOR 2 datasets

ChIP WA01 GSE104690.BCOR.WA01 163 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 127 bp overlap

BRD4 1 dataset

ChIP HAP1 GSE108387.BRD4.HAP1 219 bp overlap

BRF1 1 dataset

ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap

CEBPB 2 datasets

ChIP H1 ENCFF871PTR 184 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 133 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 172 bp overlap

CREM 1 dataset

ChIP WTC11 ENCFF209ZUE 142 bp overlap

CTCF 1 dataset

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 201 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 120 bp overlap

FEZF1 2 datasets

ChIP HEK293 ENCFF528YED 208 bp overlap

ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 143 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 172 bp overlap

GCM1 1 dataset

Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap

GCM2 1 dataset

Motif DE_12h DE_12h-GCM2_MA0767.2 8 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

HDAC2 2 datasets

ChIP H1 ENCFF939VKA 209 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 159 bp overlap

IKZF3 2 datasets

ChIP HEK293 ENCFF518OXG 219 bp overlap

ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 162 bp overlap

IRF4 1 dataset

ChIP NCI-H929 GSE56857.IRF4.NCI-H929 91 bp overlap

MAZ 1 dataset

ChIP HEK293 GSE76494.MAZ.HEK293 150 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCFF065NZG 213 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 219 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 219 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 174 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 219 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 219 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 180 bp overlap

ChIP hESC GSE18292.NANOG.hESC 119 bp overlap

NFATC3 1 dataset

Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap

NFATC4 1 dataset

Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap

Nfat5 1 dataset

Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 1 dataset

Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 1 dataset

Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap

OSR2 2 datasets

ChIP HEK293 ENCFF875BDB 219 bp overlap

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 142 bp overlap

OTX2 1 dataset

ChIP WTC11 ENCFF634NAO 187 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 158 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 173 bp overlap

POU5F1 12 datasets

ChIP BG03 GSE21614.POU5F1.BG03 198 bp overlap

ChIP GM23338 ENCFF333SNB 219 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 219 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 219 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 219 bp overlap

ChIP OSK GSE81899.POU5F1.OSK 118 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 164 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 160 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 219 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 219 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 219 bp overlap

PRDM4 2 datasets

ChIP HEK293 ENCFF069PHD 182 bp overlap

ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 124 bp overlap

PRDM6 3 datasets

ChIP HEK293 ENCFF283AJL 132 bp overlap

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 219 bp overlap

ChIP HEK293 GSE76494.PRDM6.HEK293 133 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm14 1 dataset

Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap

RAD21 4 datasets

ChIP HAP1 GSE126634.RAD21.HAP1 219 bp overlap

ChIP HAP1 GSE152721.RAD21.HAP1 219 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 219 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 219 bp overlap

RBPJ 1 dataset

ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 219 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 148 bp overlap

SCRT2 1 dataset

ChIP HEK293 ENCFF711QQB 86 bp overlap

SIN3A 3 datasets

ChIP H1 ENCFF896IJG 219 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 157 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 200 bp overlap

SIX2 2 datasets

ChIP HEK GSE73865.SIX2.HEK 219 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 191 bp overlap

SMARCA4 4 datasets

ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 219 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 219 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 219 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 219 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 184 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 200 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 196 bp overlap

SOX2 5 datasets

ChIP HNSC GSE69479.SOX2.HNSC 212 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 219 bp overlap

ChIP RENVM GSE49404.SOX2.RENVM 176 bp overlap

ChIP hESC GSE18292.SOX2.hESC 127 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 219 bp overlap

SP4 1 dataset

ChIP HEK293 GSE76494.SP4.HEK293 149 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap

TAF7 1 dataset

ChIP H1 ENCFF061XZZ 219 bp overlap

TBX19 1 dataset

Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap

TBXT 1 dataset

Motif DE_12h DE_12h-TBXT_MA0009.2 16 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 105 bp overlap

WT1 2 datasets

ChIP HEK293 ENCFF906HIR 105 bp overlap

ChIP HEK293 ENCSR966PJJ.WT1.HEK293 82 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 162 bp overlap

ZBTB17 1 dataset

ChIP HEK293 ENCFF865LIO 219 bp overlap

ZBTB20 2 datasets

ChIP HEK293 ENCFF524ADK 219 bp overlap

ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 219 bp overlap

ZBTB44 2 datasets

ChIP HEK293 ENCFF560VPN 126 bp overlap

ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 219 bp overlap

ZBTB8A 2 datasets

ChIP HEK293 ENCFF303WRD 219 bp overlap

ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 219 bp overlap

ZEB2 2 datasets

ChIP HEK293 ENCFF847JIE 219 bp overlap

ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 219 bp overlap

ZFP14 1 dataset

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

ZFP64 1 dataset

ChIP HEK293 GSE76494.ZFP64.HEK293 210 bp overlap

ZFP69B 1 dataset

ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 219 bp overlap

ZNF101 1 dataset

ChIP HEK293 ENCSR462FWS.ZNF101.HEK293 153 bp overlap

ZNF2 1 dataset

ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 168 bp overlap

ZNF213 1 dataset

ChIP HEK293 ENCSR295GRB.ZNF213.HEK293 119 bp overlap

ZNF24 1 dataset

ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 112 bp overlap

ZNF273 1 dataset

ChIP HEK293T GSE78099.ZNF273.HEK293T 136 bp overlap

ZNF30 1 dataset

ChIP HEK293 GSE76494.ZNF30.HEK293 142 bp overlap

ZNF335 2 datasets

ChIP HEK293 ENCFF784SLD 202 bp overlap

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 219 bp overlap

ZNF34 2 datasets

ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 197 bp overlap

ChIP HEK293 GSE76494.ZNF34.HEK293 155 bp overlap

ZNF35 1 dataset

ChIP HEK293 GSE76494.ZNF35.HEK293 219 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 71 bp overlap

ZNF449 1 dataset

ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 219 bp overlap

ZNF554 1 dataset

ChIP HEK293 GSE76494.ZNF554.HEK293 102 bp overlap

ZNF574 2 datasets

Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap

ChIP HEK293 GSE76494.ZNF574.HEK293 219 bp overlap

ZNF582 1 dataset

Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap

ZNF629 1 dataset

ChIP HEK293 ENCSR351NON.ZNF629.HEK293 107 bp overlap

ZNF660 2 datasets

ChIP HEK293 ENCFF282RUS 219 bp overlap

ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 139 bp overlap

ZNF692 1 dataset

ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 219 bp overlap

ZNF778 1 dataset

ChIP HEK293 GSE76494.ZNF778.HEK293 219 bp overlap

ZNF843 1 dataset

ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 73 bp overlap

ZSCAN16 1 dataset

ChIP HEK293 GSE76494.ZSCAN16.HEK293 219 bp overlap

ZSCAN5C 2 datasets

ChIP HEK293 ENCFF343DTU 219 bp overlap

ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 173 bp overlap