chr5 : 96,699,357 – 96,699,773
416 bp 83 TFs 1 linked gene
This 416 bp open chromatin element is linked to CAST and is bound by 83 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CAST 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:96,694,357 – 96,704,773
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 165 bp overlap
ARID1B 3 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 100 bp overlap
ChIP K562 ENCFF938UXQ 361 bp overlap
ChIP K562 ENCFF938UXQ 261 bp overlap
ARNT::HIF1A 1 dataset
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 296 bp overlap
ATF3 1 dataset
ChIP WA01 ENCSR000BKC.ATF3.WA01 135 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 167 bp overlap
DPF1 2 datasets
ChIP K-562 GSE97661.DPF1.K-562 228 bp overlap
ChIP MCF-7 GSE97661.DPF1.MCF-7 134 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 318 bp overlap
EGR1 1 dataset
ChIP K-562 ENCSR211LTF.EGR1.K-562 191 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 119 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 280 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 416 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 197 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 236 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 295 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 218 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 347 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 297 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 136 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 61 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 142 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 238 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 113 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 178 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 164 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 189 bp overlap
HAND2 2 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 251 bp overlap
ChIP K562 ENCFF968WBH 327 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 290 bp overlap
HIF1A 1 dataset
ChIP macrophage_HYPO GSE43109.HIF1A.macrophage_HYPO 96 bp overlap
HSF2 1 dataset
Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 296 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 416 bp overlap
ChIP K562 ENCFF348IBL 246 bp overlap
ChIP K562 ENCFF771OHZ 186 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCFF518OXG 171 bp overlap
IRF2 2 datasets
ChIP K562 ENCFF248LJZ 345 bp overlap
ChIP K562 ENCFF248LJZ 195 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 257 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 334 bp overlap
MAX 4 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 203 bp overlap
ChIP K562 ENCFF110LJS 284 bp overlap
ChIP K562 ENCFF524IJO 359 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 103 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 176 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 259 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
MYCN 1 dataset
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 112 bp overlap
NEUROG2 2 datasets
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
Motif ES_0h ES_0h-NEUROG2_MA1642.2 7 bp overlap
NFIA 2 datasets
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIX 2 datasets
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
NFYA 4 datasets
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
Motif ES_0h ES_0h-NFYA_MA0060.4 8 bp overlap
ChIP K-562 GSE26439.NFYA.K-562 242 bp overlap
ChIP K562 ENCFF732HOX 324 bp overlap
NFYB 6 datasets
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Motif ES_0h ES_0h-NFYB_MA0502.3 9 bp overlap
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 233 bp overlap
ChIP HepG2 ENCFF174VYX 336 bp overlap
ChIP K-562 GSE26439.NFYB.K-562 266 bp overlap
ChIP WTC11 ENCFF751ZTQ 291 bp overlap
NFYC 4 datasets
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
Motif ES_0h ES_0h-NFYC_MA1644.2 7 bp overlap
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 266 bp overlap
ChIP HepG2 ENCFF836FYP 337 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 228 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 264 bp overlap
POU5F1 3 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 101 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 342 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 189 bp overlap
RAD51 2 datasets
ChIP K-562 ENCSR524BUE.RAD51.K-562 286 bp overlap
ChIP K562 ENCFF133ELP 191 bp overlap
RBM39 1 dataset
ChIP K-562 GSE120104.RBM39.K-562 167 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 218 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 137 bp overlap
REST 1 dataset
ChIP K-562 ENCSR137ZMQ.REST.K-562 214 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 196 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 173 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 183 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 84 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 154 bp overlap
SREBP2 1 dataset
ChIP monocyte GSE129202.SREBP2.monocyte 259 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 153 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 92 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
USF1 21 datasets
ChIP A-549 ENCSR000BJB.USF1.A-549 201 bp overlap
ChIP A-549 ENCSR000BHX.USF1.A-549 181 bp overlap
ChIP A-549 ENCSR000BPV.USF1.A-549 180 bp overlap
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif ES_0h ES_0h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 195 bp overlap
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 279 bp overlap
ChIP HCT116 ENCFF330PYP 169 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 197 bp overlap
ChIP HepG2 ENCFF201JKA 163 bp overlap
ChIP HepG2 ENCFF807KYJ 190 bp overlap
ChIP Ishikawa ENCFF728IEG 87 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 193 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 237 bp overlap
ChIP K562 ENCFF202SFC 303 bp overlap
ChIP K562 ENCFF633EZB 103 bp overlap
ChIP SK-N-SH ENCFF967PDP 247 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 222 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 171 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 332 bp overlap
ChIP WTC11 ENCFF699QGS 317 bp overlap
USF2 14 datasets
ChIP A-549 ENCSR563FBT.USF2.A-549 241 bp overlap
ChIP A549 ENCFF343KII 255 bp overlap
ChIP GM12878 GSE97661.USF2.GM12878 203 bp overlap
ChIP H1 ENCFF434EDF 247 bp overlap
ChIP HeLa-S3 ENCFF765YUZ 249 bp overlap
ChIP HeLa-S3 ENCSR000ECW.USF2.HeLa-S3 209 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 216 bp overlap
ChIP IMR-90 ENCFF438KUN 118 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 206 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 173 bp overlap
ChIP K562 ENCFF306QPU 238 bp overlap
ChIP K562 ENCFF397QGU 72 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 203 bp overlap
ChIP WTC11 ENCFF139JAW 212 bp overlap
ZBTB26 1 dataset
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 76 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 242 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif ES_0h ES_0h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF136 2 datasets
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
Motif ES_0h ES_0h-ZNF136_MA1588.1 15 bp overlap
ZNF143 4 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 188 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 162 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 194 bp overlap
ZNF274 1 dataset
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF592 1 dataset
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 281 bp overlap
ZNF669 1 dataset
Motif DE_12h DE_12h-ZNF669_MA1985.1 15 bp overlap
ZNF680 2 datasets
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
ZNF85 1 dataset
ChIP HEK293 GSE76494.ZNF85.HEK293 129 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
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