chr1 : 81,312,252 – 81,312,811
559 bp 115 TFs 1 linked gene
This 559 bp open chromatin element is linked to ADGRL2 and is bound by 115 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ADGRL2 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:81,307,252 – 81,317,811
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
115 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 291 bp overlap
ARNT::HIF1A 3 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 559 bp overlap
ChIP H1 ENCFF399KAM 511 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 559 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 557 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 182 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 299 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 407 bp overlap
BRD3 2 datasets
ChIP H-1 GSE126661.BRD3.H-1 247 bp overlap
ChIP HUVEC-C GSE60171.BRD3.HUVEC-C 117 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CEBPA 1 dataset
Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap
CEBPB 1 dataset
ChIP H1 ENCFF871PTR 259 bp overlap
CEBPD 1 dataset
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 205 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 170 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 288 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 487 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 168 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 258 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 161 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 215 bp overlap
CREB3L4 2 datasets
Motif DE_12h DE_12h-CREB3L4_MA1474.2 10 bp overlap
Motif ES_0h ES_0h-CREB3L4_MA1474.2 10 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 244 bp overlap
CTBP2 2 datasets
ChIP WA01 ENCSR000EUO.CTBP2.WA01 334 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 112 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 345 bp overlap
DMRTA2 2 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 397 bp overlap
EBF1 1 dataset
Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap
EBF3 1 dataset
Motif ES_0h ES_0h-EBF3_MA1637.2 9 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 290 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 242 bp overlap
ChIP hESC GSE17917.EP300.hESC 394 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 221 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 437 bp overlap
ChIP WTC11 ENCFF812SCD 276 bp overlap
Ebf2 1 dataset
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 296 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 251 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 309 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 230 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 267 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 332 bp overlap
HDAC2 5 datasets
ChIP H1 ENCFF353UJQ 559 bp overlap
ChIP H1 ENCFF353UJQ 326 bp overlap
ChIP H1 ENCFF939VKA 234 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 432 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 235 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF4 3 datasets
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
Motif ES_0h ES_0h-IRF4_MA1419.2 14 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
Irf1 2 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 377 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 294 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 559 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 520 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 559 bp overlap
ChIP H1 ENCFF621PNP 241 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 559 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 412 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 134 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 491 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 182 bp overlap
KLF4 1 dataset
ChIP WA09 GSE105028.KLF4.WA09 206 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 309 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 483 bp overlap
ChIP WTC11 ENCFF223QFY 549 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 551 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 299 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 265 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 559 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 144 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 463 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 416 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 516 bp overlap
ChIP hESC GSE20650.NANOG.hESC 252 bp overlap
ChIP hESC GSE18292.NANOG.hESC 192 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 180 bp overlap
NIPBL 3 datasets
ChIP WA09 GSE105028.NIPBL.WA09 355 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 442 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 209 bp overlap
NR2F1 1 dataset
Motif ES_0h ES_0h-NR2F1_MA1537.2 13 bp overlap
NR3C1 1 dataset
ChIP HeLa-B2_GRKD_DMSO GSE24518.NR3C1.HeLa-B2_GRKD_DMSO 121 bp overlap
Nr2f6 1 dataset
Motif ES_0h ES_0h-Nr2f6_MA0677.2 13 bp overlap
OSR2 1 dataset
Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 182 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 190 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 376 bp overlap
POU2F1::SOX2 1 dataset
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 11 datasets
ChIP GM23338 ENCFF333SNB 283 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 418 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 559 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 172 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 351 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 377 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 275 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 301 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 559 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 309 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 329 bp overlap
PRDM14 4 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 295 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 60 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 397 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 299 bp overlap
Pou5f1::Sox2 2 datasets
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Pparg::Rxra 1 dataset
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
Prdm4 2 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 239 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 373 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 366 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 353 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 183 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 322 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 317 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 448 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 160 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 382 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 559 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 338 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 273 bp overlap
SMAD2_3 1 dataset
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 308 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 313 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 189 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 233 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 324 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 559 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 559 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 321 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 460 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 559 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 559 bp overlap
SNAI2 1 dataset
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
SOX14 2 datasets
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
Motif ES_0h ES_0h-SOX14_MA1562.2 9 bp overlap
SOX18 2 datasets
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
Motif ES_0h ES_0h-SOX18_MA1563.2 8 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 520 bp overlap
ChIP hESC GSE18292.SOX2.hESC 159 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 433 bp overlap
SOX4 2 datasets
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SOX8 2 datasets
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
Motif ES_0h ES_0h-SOX8_MA0868.3 7 bp overlap
SOX9 2 datasets
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
Motif ES_0h ES_0h-SOX9_MA0077.2 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 276 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 239 bp overlap
SP2 1 dataset
ChIP H1 ENCFF903ACN 322 bp overlap
SPIB 1 dataset
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
STAT1::STAT2 1 dataset
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
Sox11 2 datasets
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Sox17 2 datasets
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox5 2 datasets
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Sox6 2 datasets
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Sox7 2 datasets
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Stat5a::Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 148 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP H1 ENCFF859IIO 318 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 242 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 517 bp overlap
TEAD4 1 dataset
ChIP ESC S26-ESC-d0-TEAD4-exp1 360 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 405 bp overlap
YY1 2 datasets
ChIP WA01 ENCSR000BKD.YY1.WA01 184 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 254 bp overlap
ZBTB12 2 datasets
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
Motif ES_0h ES_0h-ZBTB12_MA1649.2 7 bp overlap
ZBTB24 1 dataset
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF143 2 datasets
ChIP WA09 GSE105028.ZNF143.WA09 268 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 352 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 446 bp overlap
ZNF320 1 dataset
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 489 bp overlap
ZNF549 2 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF692 1 dataset
Motif ES_0h ES_0h-ZNF692_MA1986.2 8 bp overlap
ZNF768 4 datasets
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap
Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap
ZNF778 1 dataset
ChIP HEK293T GSE78099.ZNF778.HEK293T 59 bp overlap
ZNF784 1 dataset
Motif ES_0h ES_0h-ZNF784_MA1717.2 8 bp overlap
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