chr2 : 237,541,290 237,542,001
711 bp 96 TFs 0 linked genes
This 711 bp open chromatin element has no linked target genes and is bound by 96 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:237,536,290 – 237,547,001
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
ARHGAP35 1 dataset
ChIP HepG2 ENCFF778RZN 58 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 711 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 71 bp overlap
ATF3 2 datasets
ChIP liver ENCFF375GID 269 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 164 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34pos GSE84677.BCL11B.thymus_CD34pos 286 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 482 bp overlap
BRD4 6 datasets
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 112 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 122 bp overlap
ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 375 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 121 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 241 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 189 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 113 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 201 bp overlap
CHD4 1 dataset
ChIP A-549 ENCSR550SCU.CHD4.A-549 106 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 170 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 321 bp overlap
ChIP GM12878 ENCFF813OXE 265 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 248 bp overlap
ChIP LCL GSE75503.EBF1.LCL 443 bp overlap
EGR1 1 dataset
ChIP liver ENCSR736BUG.EGR1.liver 148 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 162 bp overlap
ESR1 6 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 205 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 211 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 183 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 242 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 175 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 76 bp overlap
ESRRA 2 datasets
ChIP HepG2 ENCFF033DVS 468 bp overlap
ChIP MCF-7 ENCSR954WVZ.ESRRA.MCF-7 178 bp overlap
FOXA1 4 datasets
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 182 bp overlap
ChIP liver ENCFF749ERP 289 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 221 bp overlap
ChIP prostate_2030 GSE130408.FOXA1.prostate_2030 185 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 511 bp overlap
ChIP DE DE-FOXA2-2 555 bp overlap
GATA2 1 dataset
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 448 bp overlap
ChIP DE DE-GATA4-2 466 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 425 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 251 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 367 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 443 bp overlap
ChIP DE DE-GATA6-2 531 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 297 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 397 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 277 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 326 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 387 bp overlap
ChIP foregut GSE117136.GATA6.foregut 426 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 326 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 711 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 115 bp overlap
HNF4A 16 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 125 bp overlap
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap
ChIP HCT-116 GSE62890.HNF4A.HCT-116 286 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 292 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 162 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 198 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 136 bp overlap
ChIP HepG2 ENCFF146SSF 247 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 159 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 154 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 177 bp overlap
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 265 bp overlap
ChIP liver ENCFF354NRH 227 bp overlap
ChIP liver ENCFF449HPV 243 bp overlap
ChIP liver ENCFF449HPV 188 bp overlap
ChIP liver ERP002306.HNF4A.liver 365 bp overlap
HNF4G 4 datasets
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 219 bp overlap
ChIP HepG2 ENCFF323ATZ 237 bp overlap
ChIP liver ENCFF170YNZ 223 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 159 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 206 bp overlap
JUND 3 datasets
ChIP A-549 ENCSR000BRF.JUND.A-549 91 bp overlap
ChIP liver ENCFF007WWT 263 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 201 bp overlap
KDM1A 1 dataset
ChIP A-549 ENCSR639GWS.KDM1A.A-549 213 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 149 bp overlap
KLF4 2 datasets
ChIP MCF-7 ENCFF948KTQ 59 bp overlap
ChIP MCF-7 ENCFF948KTQ 258 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 329 bp overlap
MAX 1 dataset
ChIP liver ENCFF092GVW 402 bp overlap
MAZ 1 dataset
ChIP MCF-7 ENCSR288IJC.MAZ.MCF-7 235 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 197 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 431 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 140 bp overlap
NR2C1 3 datasets
ChIP GM12878 ENCFF101ELO 315 bp overlap
ChIP GM12878 ENCSR784VIQ.NR2C1.GM12878 329 bp overlap
ChIP K-562 ENCSR178DEG.NR2C1.K-562 265 bp overlap
NR2C2 3 datasets
ChIP Hep-G2 ENCSR559ZKI.NR2C2.Hep-G2 291 bp overlap
ChIP HepG2 ENCFF026DHW 231 bp overlap
ChIP HepG2 ENCFF944PRH 402 bp overlap
NR2F1 5 datasets
ChIP GM12878 ENCFF273VKX 158 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 385 bp overlap
ChIP HepG2 ENCFF518ZRY 354 bp overlap
ChIP HepG2 ENCFF953UJL 275 bp overlap
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 374 bp overlap
NR2F2 7 datasets
ChIP Hep-G2 ENCSR000BVM.NR2F2.Hep-G2 181 bp overlap
ChIP MCF-7 ENCFF329FZB 271 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 365 bp overlap
ChIP liver ENCFF427MRU 283 bp overlap
ChIP liver ENCFF565JGD 325 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 258 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 189 bp overlap
NR2F6 4 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 427 bp overlap
ChIP HepG2 ENCFF429VKC 223 bp overlap
ChIP HepG2 ENCFF429VKC 441 bp overlap
ChIP HepG2 ENCFF514UJI 154 bp overlap
NR4A1 1 dataset
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 142 bp overlap
NR5A2 1 dataset
ChIP A-549 ENCSR190GIW.NR5A2.A-549 114 bp overlap
ONECUT1 4 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 193 bp overlap
ChIP HepG2 ENCFF243FIR 247 bp overlap
ChIP liver ERP002306.ONECUT1.liver 133 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 249 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 183 bp overlap
ChIP HepG2 ENCFF526NOJ 356 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 60 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 306 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 229 bp overlap
POGK 1 dataset
ChIP HepG2 ENCFF029WNT 206 bp overlap
PPARG 2 datasets
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 138 bp overlap
ChIP THP-1_DIFF GSE25426.PPARG.THP-1_DIFF 335 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 219 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 288 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 102 bp overlap
RELA 3 datasets
ChIP HeLa-B2_TNFA GSE24518.RELA.HeLa-B2_TNFA 167 bp overlap
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 181 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 236 bp overlap
REST 5 datasets
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 95 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 469 bp overlap
ChIP liver ENCFF240FWT 236 bp overlap
ChIP liver ENCSR867WPH.REST.liver 181 bp overlap
ChIP liver ENCSR893QWP.REST.liver 77 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 116 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 177 bp overlap
RXRA 3 datasets
ChIP Hep-G2 ENCSR000BHU.RXRA.Hep-G2 192 bp overlap
ChIP liver ENCFF077DAP 288 bp overlap
ChIP liver ENCFF807CIA 276 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 206 bp overlap
SMARCA4 2 datasets
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 51 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 220 bp overlap
SMARCB1 2 datasets
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 118 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 56 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 711 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 215 bp overlap
ChIP liver ENCFF769YSM 154 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCFF827PZY 51 bp overlap
SPI1 2 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 156 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 226 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 215 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 159 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 203 bp overlap
TCF12 2 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 286 bp overlap
ChIP A-549 ENCSR000BQQ.TCF12.A-549 85 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 428 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 126 bp overlap
THRA 1 dataset
ChIP HepG2 ENCFF025KMX 318 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 238 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
TSC22D2 1 dataset
ChIP MCF-7 ENCFF588BUN 89 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 292 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 215 bp overlap
YY1 3 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 153 bp overlap
ChIP liver ENCFF400MBC 329 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 126 bp overlap
YY1AP1 1 dataset
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 244 bp overlap
ZFX 3 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 105 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 552 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 267 bp overlap
ZNF217 3 datasets
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 327 bp overlap
ChIP HepG2 ENCFF455XGO 306 bp overlap
ChIP HepG2 ENCFF455XGO 481 bp overlap
ZNF548 1 dataset
ChIP HepG2 ENCFF586TZH 360 bp overlap
ZNF563 1 dataset
ChIP HepG2 ENCFF736TZS 158 bp overlap
ZNF623 2 datasets
ChIP HEK293 ENCFF505YHP 240 bp overlap
ChIP HEK293 ENCSR022IZK.ZNF623.HEK293 203 bp overlap
ZNF891 2 datasets
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 176 bp overlap
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 95 bp overlap