chrX : 138,710,875 138,711,289
414 bp 84 TFs 2 linked genes
This 414 bp open chromatin element is linked to FGF13-AS1 and FGF13 and is bound by 84 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
FGF13-AS1 161 bp At TSS Proximity
FGF13 427 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:138,705,875 – 138,716,289
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 156 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 310 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 325 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 414 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 264 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 285 bp overlap
BRD4 5 datasets
ChIP COLO-320 GSE73319.BRD4.COLO-320 272 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 228 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 414 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 247 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 190 bp overlap
CBX7 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 233 bp overlap
ChIP hESC GSE133412.CBX7.hESC 269 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 167 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 324 bp overlap
CREB1 2 datasets
ChIP MDA-MB-134-VI GSE109103.CREB1.MDA-MB-134-VI 223 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 103 bp overlap
CTCF 1 dataset
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 183 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 162 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 335 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 414 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 322 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 414 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 195 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 274 bp overlap
ESR1 4 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 267 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 259 bp overlap
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 278 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 238 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 326 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 235 bp overlap
EZH2 16 datasets
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 65 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 261 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 79 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 198 bp overlap
ChIP Pfeiffer GSE45982.EZH2.Pfeiffer 183 bp overlap
ChIP astrocyte ENCFF365JTP 414 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 387 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 360 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 175 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 291 bp overlap
ChIP hepatocyte ENCFF552DZB 414 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 414 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 414 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 129 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 303 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 177 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 169 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 284 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 414 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 246 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 220 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 63 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 112 bp overlap
KDM4A 5 datasets
ChIP H1 ENCFF078LED 414 bp overlap
ChIP H1 ENCFF078LED 104 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 414 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 179 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 269 bp overlap
KDM4C 1 dataset
ChIP SW1783 GSE92483.KDM4C.SW1783 135 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 414 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 140 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 349 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 176 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 97 bp overlap
MYC-DAXX 1 dataset
ChIP HEK293_GAL4-DBD GSE107348.MYC-DAXX.HEK293_GAL4-DBD 378 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 295 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 222 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 398 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 414 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 335 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 303 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 264 bp overlap
PHF8 2 datasets
ChIP H1 ENCFF427UFV 355 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 291 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 414 bp overlap
POLR2G 3 datasets
ChIP K562 ENCFF047BLG 414 bp overlap
ChIP K562 ENCFF648YPL 414 bp overlap
ChIP K562 ENCFF648YPL 181 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 264 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 414 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 294 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 173 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 305 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 296 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 414 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 233 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 360 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 414 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 414 bp overlap
RBM22 2 datasets
ChIP K-562 ENCSR848AOP.RBM22.K-562 414 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 414 bp overlap
RNF2 2 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 256 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 218 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 383 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 373 bp overlap
RYBP 2 datasets
ChIP WA01 GSE104690.RYBP.WA01 208 bp overlap
ChIP WA01 GSE104690.RYBP.WA01 127 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 329 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 314 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 251 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 172 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 173 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 135 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 343 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 398 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 281 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 241 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 345 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 180 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 274 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 414 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 235 bp overlap
SUZ12 9 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 414 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 395 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 132 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 281 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 258 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 302 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 306 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 310 bp overlap
ChIP hESC_TKO GSE133412.SUZ12.hESC_TKO 152 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 385 bp overlap
ChIP H1 ENCFF478SZO 185 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 373 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 163 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 266 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 82 bp overlap
TFDP1 1 dataset
ChIP MM1-S GSE80661.TFDP1.MM1-S 261 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 315 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 111 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 322 bp overlap
YY1 3 datasets
ChIP HEK293 ENCFF734SBY 371 bp overlap
ChIP HEK293 ENCSR859RAO.YY1.HEK293 279 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 271 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 346 bp overlap
ZBTB20 3 datasets
ChIP HEK293 ENCFF524ADK 261 bp overlap
ChIP HEK293 ENCFF524ADK 223 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 402 bp overlap
ZBTB26 3 datasets
ChIP HEK293 ENCFF752POA 414 bp overlap
ChIP HEK293 ENCFF752TCU 414 bp overlap
ChIP HEK293 ENCSR229DYF.ZBTB26.HEK293 414 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 307 bp overlap
ChIP K562 ENCFF875HLX 120 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 125 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 283 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 201 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 216 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 65 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 156 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 348 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 399 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 389 bp overlap
ZNF777 2 datasets
ChIP HEK293 ENCFF569SYP 371 bp overlap
ChIP HEK293 ENCSR295BIP.ZNF777.HEK293 307 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 203 bp overlap