chr17 : 68,198,160 – 68,198,530
370 bp 78 TFs 3 linked genes
This 370 bp open chromatin element is linked to ARHGAP27P2, ENSG00000290793, and ENSG00000274712 and is bound by 78 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ARHGAP27P2 389 bp At TSS Proximity
ENSG00000290793 7.0 kb Proximal Proximity
ENSG00000274712 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:68,193,160 – 68,203,530
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
AR 3 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 305 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 274 bp overlap
ChIP VCaP GSE148358.AR.VCaP 244 bp overlap
ARID1A 5 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 281 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 370 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 370 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 319 bp overlap
ChIP MCF-7_JQ1 GSE123284.ARID1A.MCF-7_JQ1 283 bp overlap
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 218 bp overlap
ARNT 3 datasets
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 370 bp overlap
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 239 bp overlap
ChIP T-47D GSE130989.ARNT.T-47D 200 bp overlap
BCOR 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 246 bp overlap
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 139 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 370 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 317 bp overlap
BRD4 10 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 370 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 224 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 270 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 175 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 213 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 269 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 276 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 175 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 290 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 312 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 277 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 295 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 305 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 140 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCFF712EXQ 370 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 92 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 218 bp overlap
ELF1 1 dataset
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 144 bp overlap
ESR1 13 datasets
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 185 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 255 bp overlap
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 282 bp overlap
ChIP MCF-7_H3B-5942 GSE115607.ESR1.MCF-7_H3B-5942 221 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 152 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 208 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 206 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 243 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 331 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 206 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 242 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 251 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 254 bp overlap
ESR1_Y537N 1 dataset
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 137 bp overlap
EZH2 26 datasets
ChIP A673 ENCFF955JRZ 116 bp overlap
ChIP A673 ENCFF955JRZ 370 bp overlap
ChIP B cell ENCFF803EMO 274 bp overlap
ChIP B cell ENCFF803EMO 317 bp overlap
ChIP GM12878 ENCFF635TDF 198 bp overlap
ChIP GM23248 ENCFF506FWX 235 bp overlap
ChIP GM23338 ENCFF613YON 303 bp overlap
ChIP H1 ENCFF232NZA 370 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 189 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 329 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 331 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 370 bp overlap
ChIP HepG2 ENCFF912EIW 51 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 370 bp overlap
ChIP SK-N-SH ENCFF657FZK 183 bp overlap
ChIP astrocyte ENCFF365JTP 370 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 128 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 370 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 370 bp overlap
ChIP hepatocyte ENCFF552DZB 370 bp overlap
ChIP myotube ENCFF857GWB 282 bp overlap
ChIP myotube ENCFF857GWB 80 bp overlap
ChIP neural progenitor cell ENCFF018MKA 370 bp overlap
ChIP neural progenitor cell ENCFF472NFV 370 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 236 bp overlap
ChIP peripheral-blood-mononuclear-cell_mut GSE115772.EZH2.peripheral-blood-mononuclear-cell_mut 121 bp overlap
EZH2_phosphoT487 3 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 370 bp overlap
ChIP PC-3 ENCSR617RSQ.EZH2_phosphoT487.PC-3 290 bp overlap
ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 249 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 140 bp overlap
GABPA 2 datasets
ChIP MCF-7 ENCFF735CHO 335 bp overlap
ChIP MCF-7 ENCFF735CHO 137 bp overlap
GATA3 3 datasets
ChIP MCF-7 ENCFF352QVM 366 bp overlap
ChIP MCF-7 ENCFF437NQS 284 bp overlap
ChIP MCF-7 ENCFF437NQS 246 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 256 bp overlap
GRHL1 2 datasets
ChIP MCF-7 GSE140185.GRHL1.MCF-7 370 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.GRHL1.MCF-7_ARID1A-KO 303 bp overlap
GRHL2 9 datasets
ChIP HBE GSE46194.GRHL2.HBE 198 bp overlap
ChIP LNCaP GSE80256.GRHL2.LNCaP 238 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 370 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 201 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 370 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 318 bp overlap
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 370 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 193 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 328 bp overlap
HDAC1 3 datasets
ChIP MCF-7_ARID1A-KO GSE123284.HDAC1.MCF-7_ARID1A-KO 259 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 348 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 182 bp overlap
HDAC2 3 datasets
ChIP MCF-7 ENCFF881POI 280 bp overlap
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 154 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 234 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE107730.INO80.Hep-G2 324 bp overlap
ChIP Hep-G2 GSE97411.INO80.Hep-G2 370 bp overlap
JARID2 2 datasets
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 370 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 370 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 370 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 144 bp overlap
KDM5B 4 datasets
ChIP MCF-7 GSE46055.KDM5B.MCF-7 316 bp overlap
ChIP SUM185 GSE46055.KDM5B.SUM185 138 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 344 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 258 bp overlap
KLF9 1 dataset
ChIP MCF-7 ENCFF618FCM 323 bp overlap
MAX 2 datasets
ChIP MCF-7 ENCFF169IXS 320 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 139 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 209 bp overlap
MSX2 1 dataset
ChIP MCF-7 ENCFF179YRV 281 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 118 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 293 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 273 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 191 bp overlap
NR3C1_mut 1 dataset
ChIP MCF-7_ICI_Dex GSE81510.NR3C1_mut.MCF-7_ICI_Dex 172 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 132 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 363 bp overlap
PAX5 1 dataset
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 141 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 244 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 302 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 365 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 321 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 370 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 350 bp overlap
PRKDC 1 dataset
ChIP MCF-7_E2 GSE60270.PRKDC.MCF-7_E2 210 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 240 bp overlap
RNF2 6 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 215 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 243 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 258 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 264 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 370 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 370 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 370 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCFF437VFY 370 bp overlap
SMARCA4 8 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 198 bp overlap
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 158 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 260 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 364 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT 297 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 275 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 328 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 296 bp overlap
SMARCA5 1 dataset
ChIP MCF-7 ENCFF666AAW 261 bp overlap
SMARCB1 6 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 282 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 302 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 336 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 363 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 288 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 274 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 264 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 151 bp overlap
SMARCE1 1 dataset
ChIP MCF-7 ENCFF890MHF 139 bp overlap
SP2 1 dataset
ChIP HEK293 GSE76494.SP2.HEK293 147 bp overlap
SPDEF 2 datasets
ChIP MCF-7 ENCFF827PZY 337 bp overlap
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 251 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 218 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 263 bp overlap
SRF 1 dataset
ChIP MCF-7 ENCFF508RYE 341 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 286 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 370 bp overlap
STAT1 1 dataset
ChIP NCI-H358 GSE79707.STAT1.NCI-H358 189 bp overlap
STAT3 3 datasets
ChIP MCF-7_jc5846 GSE126004.STAT3.MCF-7_jc5846 164 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 278 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 219 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF881NFR 370 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 214 bp overlap
ChIP NT2/D1 ENCFF574SXS 370 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 279 bp overlap
TARDBP 1 dataset
ChIP MCF-7 ENCFF924WTI 306 bp overlap
TEAD4 1 dataset
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 179 bp overlap
TFAP2C 3 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 158 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 370 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 197 bp overlap
TRIM24 2 datasets
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 370 bp overlap
ChIP LNCaP_ETOH GSE69331.TRIM24.LNCaP_ETOH 156 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
ZFP90 1 dataset
ChIP HepG2 ENCFF409XXV 370 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 191 bp overlap
ZNF217 2 datasets
ChIP MCF-7 ENCFF379OSU 370 bp overlap
ChIP MCF-7 ENCFF379OSU 272 bp overlap
ZNF24 1 dataset
ChIP MCF-7 ENCFF861XIL 345 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 146 bp overlap
ZNF558 1 dataset
ChIP HepG2 ENCFF210VCS 220 bp overlap
ZNF579 2 datasets
ChIP MCF-7 ENCFF550XRS 333 bp overlap
ChIP MCF-7 ENCSR018MQH.ZNF579.MCF-7 311 bp overlap
ZNF800 1 dataset
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 311 bp overlap
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