chr13 : 77,528,914 77,530,060
1,146 bp 133 TFs 0 linked genes
This 1.1 kb open chromatin element has no linked target genes and is bound by 133 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:77,523,914 – 77,535,060
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
133 transcription factors
Source
Cell type
AHR 2 datasets
ChIP GM01310_3MC GSE116632.AHR.GM01310_3MC 132 bp overlap
ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 136 bp overlap
ARNT 2 datasets
ChIP GM12878 ENCFF831TWO 384 bp overlap
ChIP GM12878 ENCSR590KEQ.ARNT.GM12878 203 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 180 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 311 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 337 bp overlap
Arid3a 1 dataset
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
BACH1 3 datasets
ChIP GM12878 ENCFF576UEQ 179 bp overlap
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 312 bp overlap
ChIP GM12878 ENCSR585CVE.BACH1.GM12878 214 bp overlap
BACH2 2 datasets
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 395 bp overlap
ChIP B-cell_siBACH2 GSE102460.BACH2.B-cell_siBACH2 343 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 231 bp overlap
BCL11A 3 datasets
ChIP GM12878 ENCFF717YPR 233 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 238 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 109 bp overlap
BHLHE40 4 datasets
ChIP GM12878 ENCFF010ZUU 268 bp overlap
ChIP GM12878 ENCFF521IZR 190 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 271 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 216 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 261 bp overlap
BRD4 6 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 278 bp overlap
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 226 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 312 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 343 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 720 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 1049 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 244 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 181 bp overlap
CREB3 1 dataset
Motif DE_36h DE_36h-CREB3_MA0638.2 12 bp overlap
CTCF 7 datasets
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 219 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 279 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 238 bp overlap
ChIP GM06990 ENCFF471OQT 297 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 203 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 179 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 150 bp overlap
DMRTA1 1 dataset
Motif DE_36h DE_36h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 2 datasets
Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap
DMRTC2 1 dataset
Motif DE_36h DE_36h-DMRTC2_MA1479.2 11 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 500 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 389 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 196 bp overlap
ChIP GM12878 ENCFF813OXE 237 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 349 bp overlap
ChIP LCL GSE75503.EBF1.LCL 200 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 504 bp overlap
EP300 3 datasets
ChIP GM12878 ENCFF039QRE 272 bp overlap
ChIP GM12878 ENCFF242HCG 243 bp overlap
ChIP GM12878 ENCSR000DZG.EP300.GM12878 196 bp overlap
ESR1 1 dataset
ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 123 bp overlap
FOSL2 1 dataset
ChIP LPS141 GSE111253.FOSL2.LPS141 261 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 463 bp overlap
ChIP DE DE-FOXA2-2 279 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 133 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 168 bp overlap
GATA2 4 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 214 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 280 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 301 bp overlap
GATA3 8 datasets
ChIP Jurkat GSE29180.GATA3.Jurkat 309 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 316 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 333 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 269 bp overlap
ChIP MCF-7 GSE128445.GATA3.MCF-7 307 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 163 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 160 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 413 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 727 bp overlap
ChIP DE DE-GATA4-2 708 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 227 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 274 bp overlap
GATA5 1 dataset
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 657 bp overlap
ChIP DE DE-GATA6-2 758 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 731 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 744 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 705 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 998 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 798 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 756 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 635 bp overlap
Gata3 3 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Gfi1B 1 dataset
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
Hand1 1 dataset
Motif DE_36h DE_36h-Hand1_MA2123.1 9 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF753XDO 353 bp overlap
ChIP GM12878 ENCFF824TGK 437 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 325 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 393 bp overlap
ChIP GM12878 ENCFF918AID 344 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 146 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 154 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 293 bp overlap
IRF3 1 dataset
Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 121 bp overlap
IRF9 1 dataset
Motif DE_36h DE_36h-IRF9_MA0653.1 15 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 559 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 183 bp overlap
MAF::NFE2 2 datasets
Motif DE_36h DE_36h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_36h DE_36h-MAFNFE2_MA0501.2 11 bp overlap
MAFF 1 dataset
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
MAFG::NFE2L1 2 datasets
Motif DE_36h DE_36h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_36h DE_36h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAFK 1 dataset
Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 255 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 327 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 285 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 64 bp overlap
MYB 5 datasets
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 386 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 326 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 474 bp overlap
Mafb 1 dataset
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Mafg 1 dataset
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 176 bp overlap
NFATC3 1 dataset
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 309 bp overlap
NFYA 1 dataset
Motif DE_36h DE_36h-NFYA_MA0060.4 8 bp overlap
NFYB 1 dataset
Motif DE_36h DE_36h-NFYB_MA0502.3 9 bp overlap
NFYC 1 dataset
Motif DE_36h DE_36h-NFYC_MA1644.2 7 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 188 bp overlap
NOTCH1 1 dataset
ChIP CUTLL1 GSE29600.NOTCH1.CUTLL1 127 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 205 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 315 bp overlap
NR6A1 1 dataset
Motif DE_36h DE_36h-NR6A1_MA1541.2 14 bp overlap
NRL 1 dataset
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Nfatc1 1 dataset
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Nfe2l2 2 datasets
Motif DE_36h DE_36h-Nfe2l2_MA0150.3 11 bp overlap
Motif DE_36h DE_36h-Nfe2l2_MA0150.3 11 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 184 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 241 bp overlap
PBX1 1 dataset
Motif DE_36h DE_36h-PBX1_MA0070.2 9 bp overlap
PRDM1 2 datasets
Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap
Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap
Pgr 1 dataset
Motif DE_36h DE_36h-Pgr_MA2323.1 17 bp overlap
Prdm15 1 dataset
Motif DE_36h DE_36h-Prdm15_MA1616.2 11 bp overlap
Prdm4 1 dataset
Motif DE_36h DE_36h-Prdm4_MA1647.3 11 bp overlap
RAD21 1 dataset
ChIP GM12878 ENCFF046CBW 106 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 283 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 356 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 256 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 280 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 280 bp overlap
RUNX3 2 datasets
Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap
ChIP GM12878 ENCFF395WHA 261 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 647 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 684 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 517 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 478 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 442 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 795 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 749 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 249 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 332 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 164 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 151 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 195 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 187 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 194 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 199 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 258 bp overlap
SOX10 1 dataset
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 456 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 187 bp overlap
SPIB 1 dataset
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
SRF 4 datasets
ChIP GM12878 ENCFF565AWY 101 bp overlap
ChIP GM12878 ENCFF878IIX 197 bp overlap
ChIP GM12878 ENCSR041XML.SRF.GM12878 214 bp overlap
ChIP GM12878 ENCSR000BMI.SRF.GM12878 92 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 222 bp overlap
Six4 1 dataset
Motif DE_36h DE_36h-Six4_MA2001.2 7 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Spz1 1 dataset
Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 340 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 292 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 257 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 339 bp overlap
TCF7L1 1 dataset
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
TFAP2A 2 datasets
Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 172 bp overlap
TFAP2B 1 dataset
Motif DE_36h DE_36h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_36h DE_36h-TFAP2E_MA1569.2 9 bp overlap
TRIM22 2 datasets
ChIP GM12878 ENCFF919OMX 324 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 279 bp overlap
TRPS1 3 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP GM12878 ENCFF150EFU 255 bp overlap
Yy1 1 dataset
Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_cDNA 157 bp overlap
ZBTB18 2 datasets
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
ZNF184 1 dataset
Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap
ZNF189 1 dataset
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
ZNF320 1 dataset
Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap
ZNF331 1 dataset
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
ZNF354A 1 dataset
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
ZNF558 2 datasets
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
ZNF675 1 dataset
Motif DE_36h DE_36h-ZNF675_MA1714.2 19 bp overlap
ZNF677 1 dataset
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
ZNF701 1 dataset
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
ZSCAN4 1 dataset
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
Zic2 1 dataset
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap