chr12 : 19,783,368 19,784,389
1,021 bp 108 TFs 0 linked genes
This 1.0 kb open chromatin element has no linked target genes and is bound by 108 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:19,778,368 – 19,789,389
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 217 bp overlap
ASH2L 2 datasets
ChIP WA01 ENCSR850KIP.ASH2L.WA01 349 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 418 bp overlap
ATF2 1 dataset
ChIP HepG2 ENCFF955VER 224 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 240 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 573 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 464 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 208 bp overlap
BRD2 3 datasets
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 141 bp overlap
ChIP NCI-H23 GSE113714.BRD2.NCI-H23 544 bp overlap
ChIP NCI-H23 GSE104481.BRD2.NCI-H23 517 bp overlap
BRD4 4 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 192 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 417 bp overlap
ChIP hESC GSE33281.BRD4.hESC 134 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 536 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 301 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 572 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 282 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ESR1 16 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 114 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 345 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 187 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 716 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 304 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 322 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 211 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 775 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 208 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 233 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 465 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 168 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 452 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 305 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 262 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 266 bp overlap
EZH2 3 datasets
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 94 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 90 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 296 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 225 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 640 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 507 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 163 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GATA1 1 dataset
Motif DE_12h DE_12h-GATA1_MA0035.5 7 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 490 bp overlap
GRHL2 3 datasets
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 191 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 141 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 194 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 316 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 180 bp overlap
HNF4A 1 dataset
ChIP hiPSC GSE104613.HNF4A.hiPSC 235 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 267 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 370 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 304 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 168 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 147 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 139 bp overlap
ChIP P493-6 GSE77061.MYC.P493-6 136 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 736 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 247 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 266 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 299 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 702 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 432 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
RBBP5 4 datasets
ChIP H1 ENCFF905HFL 440 bp overlap
ChIP H1 ENCFF905HFL 671 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 220 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 143 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 181 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 208 bp overlap
RUNX1 2 datasets
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 292 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 237 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD3 2 datasets
Motif DE_12h DE_12h-SMAD3_MA0795.1 10 bp overlap
Motif DE_12h DE_12h-SMAD3_MA0795.1 10 bp overlap
SMAD5 1 dataset
Motif DE_12h DE_12h-SMAD5_MA1557.1 10 bp overlap
SMARCA4 2 datasets
ChIP NGP GSE134626.SMARCA4.NGP 174 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 460 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 246 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 274 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 181 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 187 bp overlap
Smad4 1 dataset
Motif DE_12h DE_12h-Smad4_MA1153.2 7 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 485 bp overlap
ChIP H1 ENCFF478SZO 485 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 222 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 168 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 121 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 217 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 330 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 143 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 521 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 206 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
YY1 8 datasets
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 113 bp overlap
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 529 bp overlap
ChIP Ishikawa ENCFF505XQX 341 bp overlap
ChIP Ishikawa ENCFF505XQX 341 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 216 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 366 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 656 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCFF191NFH 597 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 461 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 459 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap