chr11 : 108,885,142 – 108,885,803

661 bp 98 TFs 0 linked genes

This 661 bp open chromatin element has no linked target genes and is bound by 98 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

98 transcription factors

APC 1 dataset

ChIP HCT-116 GSE103894.APC.HCT-116 255 bp overlap

ARNT::HIF1A 1 dataset

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

BRD4 2 datasets

ChIP HCT-116 GSE57628.BRD4.HCT-116 262 bp overlap

ChIP NMC24335 GSE96775.BRD4.NMC24335 300 bp overlap

CBX3 2 datasets

ChIP HCT116 ENCFF947BOL 375 bp overlap

ChIP HCT116 ENCFF947BOL 431 bp overlap

CEBPA 1 dataset

Motif DE_36h DE_36h-CEBPA_MA0102.5 10 bp overlap

CEBPB 2 datasets

ChIP HCT116 ENCFF097OLY 417 bp overlap

ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 109 bp overlap

Crx 1 dataset

Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap

DMRTA2 1 dataset

Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 198 bp overlap

EP300 2 datasets

ChIP Ishikawa ENCFF364ZWT 347 bp overlap

ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 274 bp overlap

ESR1 16 datasets

ChIP Ishikawa GSE99905.ESR1.Ishikawa 207 bp overlap

ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 157 bp overlap

ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 139 bp overlap

ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 388 bp overlap

ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 303 bp overlap

ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 553 bp overlap

ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 95 bp overlap

ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 478 bp overlap

ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 588 bp overlap

ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 504 bp overlap

ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 478 bp overlap

ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 606 bp overlap

ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 548 bp overlap

ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 251 bp overlap

ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 521 bp overlap

ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 497 bp overlap

ESRRA 1 dataset

Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap

ESRRB 1 dataset

Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap

Esrrg 1 dataset

Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FOXM1 2 datasets

ChIP Ishikawa ENCFF578VDD 319 bp overlap

ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 159 bp overlap

GATA1 1 dataset

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap

GATA6 1 dataset

ChIP DE_D2 S55-DE-d2-GATA6-exp2 334 bp overlap

GLIS1 2 datasets

ChIP HEK293 ENCFF299RSE 322 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 381 bp overlap

GLIS2 1 dataset

ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 352 bp overlap

GSC 1 dataset

Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap

Gli1 1 dataset

Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap

HIC1 2 datasets

ChIP HEK293 ENCFF252CFL 441 bp overlap

ChIP HEK293 ENCSR803GYT.HIC1.HEK293 276 bp overlap

IKZF3 1 dataset

ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 224 bp overlap

IRF6 1 dataset

Motif DE_12h DE_12h-IRF6_MA1509.1 9 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 179 bp overlap

KLF8 1 dataset

ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 206 bp overlap

MAX 1 dataset

ChIP Ishikawa ENCFF064TDQ 442 bp overlap

NFIC 1 dataset

ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 177 bp overlap

NIPBL 1 dataset

ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 98 bp overlap

NR2C1 1 dataset

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

NR2F2 1 dataset

Motif DE_12h DE_12h-NR2F2_MA1111.2 7 bp overlap

NR5A1 1 dataset

Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap

NUTM1 1 dataset

ChIP NMC24335 GSE96775.NUTM1.NMC24335 661 bp overlap

Nr1H2 1 dataset

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap

Nr5A2 1 dataset

Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap

OSR2 2 datasets

ChIP HEK293 ENCFF875BDB 380 bp overlap

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 585 bp overlap

OTX1 1 dataset

Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap

PAF1 1 dataset

ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 221 bp overlap

PATZ1 2 datasets

ChIP HEK293 ENCFF016MNJ 155 bp overlap

ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 399 bp overlap

PHIP 2 datasets

ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 117 bp overlap

ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 212 bp overlap

PHOX2B 1 dataset

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 134 bp overlap

PITX1 1 dataset

Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 255 bp overlap

PRDM10 1 dataset

ChIP HEK293 ENCFF145WQQ 417 bp overlap

PRDM9 1 dataset

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

Ppara 1 dataset

Motif DE_12h DE_12h-Ppara_MA2338.1 7 bp overlap

RHOXF1 1 dataset

Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap

RUNX3 1 dataset

Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap

Rarg 1 dataset

Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap

SCRT1 1 dataset

ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 477 bp overlap

SIX1 1 dataset

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

SIX2 3 datasets

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

ChIP HEK GSE73865.SIX2.HEK 233 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 252 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 428 bp overlap

SMARCA4 1 dataset

ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 101 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 220 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 505 bp overlap

SP1 1 dataset

ChIP HCT116 ENCFF800LBN 437 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SP7 2 datasets

ChIP HEK293 ENCFF733RBE 235 bp overlap

ChIP HEK293 ENCSR468IJT.SP7.HEK293 661 bp overlap

STAT1::STAT2 1 dataset

Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap

SUPT5H 2 datasets

ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 310 bp overlap

ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 266 bp overlap

Six3 1 dataset

Motif DE_36h DE_36h-Six3_MA0631.2 11 bp overlap

Spz1 2 datasets

Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap

TCF12 2 datasets

ChIP Ishikawa ENCFF467DDW 384 bp overlap

ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 253 bp overlap

TCF7L2 2 datasets

ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 319 bp overlap

ChIP HCT116 ENCFF038POZ 371 bp overlap

TEAD1 1 dataset

ChIP HCT-116 GSE108920.TEAD1.HCT-116 241 bp overlap

TEAD4 2 datasets

ChIP Ishikawa ENCFF772OTG 301 bp overlap

ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 217 bp overlap

WT1 2 datasets

ChIP HEK293 ENCFF906HIR 205 bp overlap

ChIP HEK293 ENCSR966PJJ.WT1.HEK293 469 bp overlap

ZBED2 1 dataset

Motif DE_12h DE_12h-ZBED2_MA1971.2 7 bp overlap

ZEB2 1 dataset

ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 488 bp overlap

ZFP14 1 dataset

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

ZNF135 1 dataset

Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap

ZNF16 2 datasets

Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap

Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap

ZNF18 2 datasets

ChIP HEK293 ENCFF066NGR 388 bp overlap

ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 470 bp overlap

ZNF189 1 dataset

ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 298 bp overlap

ZNF2 1 dataset

ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 55 bp overlap

ZNF213 1 dataset

Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCFF784SLD 525 bp overlap

ZNF341 1 dataset

ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 265 bp overlap

ZNF35 1 dataset

Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

ZNF362 2 datasets

ChIP HEK293 ENCFF436CGE 435 bp overlap

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 328 bp overlap

ZNF460 1 dataset

Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap

ZNF479 1 dataset

ChIP HEK293T GSE78099.ZNF479.HEK293T 133 bp overlap

ZNF558 1 dataset

Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap

ZNF580 1 dataset

ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 341 bp overlap

ZNF600 1 dataset

ChIP HEK293 ENCFF785JSX 501 bp overlap

ZNF629 1 dataset

ChIP HEK293 ENCSR351NON.ZNF629.HEK293 426 bp overlap

ZNF664 2 datasets

ChIP HEK293 ENCFF343XSW 275 bp overlap

ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 221 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap