chr11 : 98,940,962 98,941,209
247 bp 85 TFs 0 linked genes
This 247 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:98,935,962 – 98,946,209
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 97 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 178 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 146 bp overlap
BRD4 3 datasets
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 192 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 233 bp overlap
ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 190 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 109 bp overlap
CEBPA 2 datasets
ChIP T-47D GSE132649.CEBPA.T-47D 174 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 247 bp overlap
CEBPB 12 datasets
ChIP H1 ENCFF871PTR 196 bp overlap
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 132 bp overlap
ChIP HeLa-S3 ENCFF722WEG 183 bp overlap
ChIP Ishikawa ENCFF010USJ 80 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 211 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 157 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 145 bp overlap
ChIP K562 ENCFF189VBN 204 bp overlap
ChIP K562 ENCFF194QGF 215 bp overlap
ChIP MCF-7 ENCFF772ZTQ 194 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 121 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 191 bp overlap
CTCF 3 datasets
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 185 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 147 bp overlap
ChIP stomach ENCSR361KVZ.CTCF.stomach 203 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 141 bp overlap
DEK 1 dataset
ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 123 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 131 bp overlap
ELL2 1 dataset
ChIP HeLa GSE40632.ELL2.HeLa 176 bp overlap
EP300 3 datasets
ChIP HeLa-S3 ENCFF089VPQ 247 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 186 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 157 bp overlap
ESR1 3 datasets
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 222 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 176 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 247 bp overlap
ESRRA 1 dataset
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
FOS 1 dataset
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 113 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
JUN 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 130 bp overlap
JUND 2 datasets
ChIP HeLa-S3 ENCFF642OHL 247 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 172 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 193 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
ChIP HCC95 GSE88976.KLF5.HCC95 218 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAX 5 datasets
ChIP HeLa-S3 ENCFF398RFF 247 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 193 bp overlap
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 141 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 247 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 230 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 179 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 127 bp overlap
MYC 2 datasets
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 165 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 217 bp overlap
MYF5 1 dataset
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 247 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 151 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 247 bp overlap
NR3C1 2 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 170 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 159 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Nr5A2 1 dataset
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 113 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 247 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 192 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
RAD21 1 dataset
ChIP HeLa-S3 ENCFF775CHI 212 bp overlap
RELA 1 dataset
ChIP KB_IL GSE52469.RELA.KB_IL 121 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
Rhox11 2 datasets
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SIX1 2 datasets
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SMAD3 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 172 bp overlap
SMC3 3 datasets
ChIP HeLa GSE126990.SMC3.HeLa 143 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 143 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 143 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 160 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 199 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 199 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 156 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 175 bp overlap
Six4 2 datasets
Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap
Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 206 bp overlap
TCF7L2 4 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 245 bp overlap
ChIP HCT116 ENCFF038POZ 115 bp overlap
ChIP HeLa-S3 ENCFF673QAB 247 bp overlap
ChIP HeLa-S3 ENCSR000EVE.TCF7L2.HeLa-S3 247 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 164 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
TP53 1 dataset
ChIP SaOS-2 GSE51268.TP53.SaOS-2 217 bp overlap
TP63 4 datasets
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 164 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 223 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 161 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 218 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
YY1 2 datasets
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 190 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 110 bp overlap
ZBTB18 1 dataset
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 170 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF8 1 dataset
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap