chr10 : 48,745,712 – 48,746,178
466 bp 84 TFs 1 linked gene
This 466 bp open chromatin element is linked to RPL13AP19 and is bound by 84 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RPL13AP19 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:48,740,712 – 48,751,178
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 236 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 300 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 185 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 212 bp overlap
BRD4 7 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 203 bp overlap
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 274 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 189 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 228 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 199 bp overlap
ChIP hESC GSE33281.BRD4.hESC 142 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 203 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 412 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 160 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 113 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 103 bp overlap
CTCF 268 datasets
ChIP 22Rv1 ENCFF466OXN 430 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 429 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 445 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 393 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 332 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 287 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 234 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 195 bp overlap
ChIP A-549 ENCSR000BHW.CTCF.A-549 164 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 131 bp overlap
ChIP A549 ENCFF034FVO 282 bp overlap
ChIP A549 ENCFF182TCQ 208 bp overlap
ChIP A549 ENCFF434LUY 228 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 184 bp overlap
ChIP BE2C ENCFF757SRF 277 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 182 bp overlap
ChIP C4-2B ENCFF821XVN 329 bp overlap
ChIP C4-2B ENCFF821XVN 187 bp overlap
ChIP C4-2B ENCFF821XVN 128 bp overlap
ChIP Caco-2 ENCFF753NZV 119 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 211 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 159 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_24h DE_24h-CTCF_MA0139.2 15 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
Motif DE_72h DE_72h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 137 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 150 bp overlap
ChIP GM23338 ENCFF531QOI 264 bp overlap
ChIP GM23338 ENCFF772DML 179 bp overlap
ChIP GM23338 ENCFF832KWE 358 bp overlap
ChIP H1 ENCFF230QSV 97 bp overlap
ChIP H1 ENCFF414GZI 210 bp overlap
ChIP H1 ENCFF764RHO 219 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP H9 ENCFF152GTF 363 bp overlap
ChIP H9 ENCFF152GTF 363 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 182 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 245 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 185 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 208 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 191 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 275 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 220 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 252 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 279 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 277 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 260 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 413 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 350 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 260 bp overlap
ChIP HCT-116 GSE92879.CTCF.HCT-116 176 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 233 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 318 bp overlap
ChIP HCT116 ENCFF003KHP 132 bp overlap
ChIP HCT116 ENCFF209YMI 250 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 69 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 53 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 87 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 53 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 149 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 165 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 122 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 134 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 277 bp overlap
ChIP HFF-Myc ENCFF680WYR 294 bp overlap
ChIP HFFc6 ENCFF005CJI 437 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 253 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 335 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 204 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 280 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 167 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 167 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 214 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 206 bp overlap
ChIP HeLa-S3 ENCFF626XQK 231 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 257 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 258 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 99 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 301 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 285 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 222 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 166 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 181 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 190 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 187 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 253 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 249 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 214 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 212 bp overlap
ChIP Hep-G2 GSE111000.CTCF.Hep-G2 208 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 139 bp overlap
ChIP HepG2 ENCFF127KUP 104 bp overlap
ChIP HepG2 ENCFF194VBQ 124 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 178 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 349 bp overlap
ChIP K-562 GSE92879.CTCF.K-562 303 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 263 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 259 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 243 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 216 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 212 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 202 bp overlap
ChIP K-562 GSE110681.CTCF.K-562 183 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 133 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 171 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 139 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 167 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 178 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 149 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 142 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 195 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 189 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 163 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 204 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 192 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 178 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 122 bp overlap
ChIP K-562_CRISPRi_N4293 GSE131349.CTCF.K-562_CRISPRi_N4293 114 bp overlap
ChIP K-562_Dox GSE92879.CTCF.K-562_Dox 292 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 327 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 212 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 174 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 225 bp overlap
ChIP K-562_RUNX1_dMQ1 GSE90691.CTCF.K-562_RUNX1_dMQ1 149 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 317 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 290 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 265 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 267 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 274 bp overlap
ChIP K-562_sgGal4 GSE132212.CTCF.K-562_sgGal4 252 bp overlap
ChIP K562 ENCFF082GOI 130 bp overlap
ChIP K562 ENCFF111MGE 188 bp overlap
ChIP K562 ENCFF400DFR 227 bp overlap
ChIP K562 ENCFF430KTH 225 bp overlap
ChIP K562 ENCFF598YSU 233 bp overlap
ChIP KB_IL-1_5Z GSE134435.CTCF.KB_IL-1_5Z 143 bp overlap
ChIP LNCAP ENCFF223HIG 373 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 206 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 103 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 214 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 199 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 159 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 229 bp overlap
ChIP MCF-7 ENCFF162GNE 226 bp overlap
ChIP MCF-7 ENCFF198DQX 229 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 229 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 150 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 180 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 187 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 159 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 117 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 110 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 242 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 294 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 236 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 108 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 235 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 330 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 375 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 209 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 148 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 246 bp overlap
ChIP PC-3 ENCFF487TUI 245 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 423 bp overlap
ChIP PC-9 ENCFF539ULB 374 bp overlap
ChIP PC-9 ENCFF539ULB 174 bp overlap
ChIP Panc1 ENCFF056JQX 254 bp overlap
ChIP Panc1 ENCFF056JQX 198 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 377 bp overlap
ChIP RWPE2 ENCFF911IEE 301 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 145 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 254 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 224 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 125 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 249 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 243 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 429 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 373 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 318 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 361 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 267 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 406 bp overlap
ChIP U2OS_interphase GSE141081.CTCF.U2OS_interphase 242 bp overlap
ChIP VCaP ENCFF858YQT 401 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 258 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 210 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 178 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 257 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 219 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 148 bp overlap
ChIP WTC11 ENCFF658QVH 324 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 169 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 135 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 266 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 238 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 170 bp overlap
ChIP endodermal cell ENCFF471YCZ 370 bp overlap
ChIP endothelial cell ENCFF663LIE 376 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 252 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 169 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 271 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 417 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 219 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 243 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 195 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 161 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 153 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 238 bp overlap
ChIP hESC GSE20650.CTCF.hESC 136 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 302 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 216 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 375 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 372 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 335 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 230 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 153 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 345 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 248 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 261 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 234 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 302 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 325 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 216 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 320 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 146 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 248 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 233 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte ENCFF667ULX 251 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 463 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 265 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 208 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 207 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 287 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 225 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 233 bp overlap
ChIP neural crest cell ENCFF182LWK 208 bp overlap
ChIP neural crest cell ENCFF182LWK 150 bp overlap
ChIP neural progenitor cell ENCFF420RBO 251 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 339 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 174 bp overlap
ChIP placenta ENCFF029PHY 194 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 218 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 252 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 130 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 242 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 372 bp overlap
ChIP smooth muscle cell ENCFF656FBT 297 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 227 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 253 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 394 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 192 bp overlap
CTCFL 2 datasets
ChIP K-562 GSE70764.CTCFL.K-562 186 bp overlap
ChIP K-562 ENCSR000BNK.CTCFL.K-562 115 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 248 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 262 bp overlap
ELF1 3 datasets
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 146 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 286 bp overlap
ChIP K562 ENCFF496AKI 265 bp overlap
ERG 3 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 411 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 293 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 291 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 258 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 308 bp overlap
ETV2::FIGLA 3 datasets
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_24h DE_24h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_48h DE_48h-ETV2FIGLA_MA1941.2 13 bp overlap
FIGLA 4 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 400 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 453 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 265 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 172 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 405 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 210 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 353 bp overlap
HMGXB4 1 dataset
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 118 bp overlap
HNRNPH1 1 dataset
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 211 bp overlap
HNRNPLL 7 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 466 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 220 bp overlap
ChIP HepG2 ENCFF952XAB 406 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 202 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 202 bp overlap
ChIP K562 ENCFF541ZGX 386 bp overlap
ChIP K562 ENCFF598PWW 386 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 254 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 155 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 121 bp overlap
KDM4A 2 datasets
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 165 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 170 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 211 bp overlap
KDM5B 2 datasets
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 375 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 216 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 335 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 144 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 168 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 347 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 200 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94782.MYCN.Kelly 116 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 146 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 140 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 466 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 405 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 429 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF706IUS 392 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 234 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 321 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 412 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 332 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 232 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 177 bp overlap
RAD21 33 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 177 bp overlap
ChIP A549 ENCFF047SFC 217 bp overlap
ChIP H1 ENCFF698EWO 172 bp overlap
ChIP H1 ENCFF967OJF 70 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 387 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 308 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 188 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 195 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 88 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 143 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 212 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 176 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 152 bp overlap
ChIP HepG2 ENCFF360ZSW 199 bp overlap
ChIP HepG2 ENCFF906QIS 92 bp overlap
ChIP HepG2 ENCFF963UBJ 226 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 177 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 99 bp overlap
ChIP K562 ENCFF169SQI 120 bp overlap
ChIP K562 ENCFF634XYR 116 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 146 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 141 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 297 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 247 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 208 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 177 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 324 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 228 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 160 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 223 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 274 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 150 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 204 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 466 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 207 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 146 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 216 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 88 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 110 bp overlap
SMC1 4 datasets
ChIP DKO GSE131606.SMC1.DKO 427 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 223 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 220 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 175 bp overlap
SMC1A 5 datasets
ChIP A-549 GSE76893.SMC1A.A-549 194 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 212 bp overlap
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 209 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d0 257 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 249 bp overlap
SMC3 8 datasets
ChIP HeLa GSE126990.SMC3.HeLa 175 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 175 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 175 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 197 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 203 bp overlap
ChIP K-562 ENCSR000EGW.SMC3.K-562 189 bp overlap
ChIP K562 ENCFF582XIX 243 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 205 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 161 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 271 bp overlap
STAG1 4 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 203 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 192 bp overlap
ChIP HepG2 ENCFF843EBZ 244 bp overlap
ChIP K-562 ENCSR153HNT.STAG1.K-562 341 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 391 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TCF7L2 1 dataset
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 195 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 239 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 310 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 189 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 102 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 104 bp overlap
ZBTB33 1 dataset
ChIP MCF-7 ENCSR231YFE.ZBTB33.MCF-7 163 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 466 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 466 bp overlap
ZEB1 4 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFX 2 datasets
ChIP HCT116 ENCFF324IZY 396 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 342 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 270 bp overlap
ZKSCAN3 4 datasets
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
Motif DE_48h DE_48h-ZKSCAN3_MA1973.2 14 bp overlap
Motif DE_72h DE_72h-ZKSCAN3_MA1973.2 14 bp overlap
Motif ES_0h ES_0h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF143 2 datasets
ChIP K-562 ENCSR000EGP.ZNF143.K-562 111 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 162 bp overlap
ZNF274 1 dataset
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 201 bp overlap
ZNF343 4 datasets
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
Motif DE_48h DE_48h-ZNF343_MA1711.2 16 bp overlap
Motif DE_72h DE_72h-ZNF343_MA1711.2 16 bp overlap
Motif ES_0h ES_0h-ZNF343_MA1711.2 16 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 337 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 220 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 147 bp overlap
ZNF598 1 dataset
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 257 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 358 bp overlap
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