chr10 : 8,046,840 – 8,047,373
533 bp 84 TFs 3 linked genes
This 533 bp open chromatin element is linked to GATA3, ENSG00000232638, and GATA3-AS1 and is bound by 84 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GATA3 1.5 kb Proximal Proximity
ENSG00000232638 4.2 kb Proximal Proximity
GATA3-AS1 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:8,041,840 – 8,052,373
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 356 bp overlap
AR 2 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 150 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 175 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 290 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 255 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 275 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 533 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 297 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 210 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 302 bp overlap
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 533 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 330 bp overlap
BRD4 8 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 191 bp overlap
ChIP BE2C GSE80151.BRD4.BE2C 375 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 258 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 247 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 533 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 375 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 422 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 223 bp overlap
CBX1 2 datasets
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 150 bp overlap
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 178 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 533 bp overlap
CBX8 3 datasets
ChIP H1 ENCFF095JHA 474 bp overlap
ChIP H1 ENCFF095JHA 427 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 361 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 103 bp overlap
CHD2 3 datasets
ChIP SK-N-SH ENCFF669KMB 289 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 218 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 176 bp overlap
CLOCK 2 datasets
ChIP MCF-7 ENCFF642OGE 224 bp overlap
ChIP MCF-7 ENCSR934JDG.CLOCK.MCF-7 331 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 460 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 533 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 383 bp overlap
DPF2 2 datasets
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 194 bp overlap
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 164 bp overlap
ELF1 1 dataset
ChIP MCF-7 ENCFF687CWI 323 bp overlap
EP300 1 dataset
ChIP T-47D ENCSR000BLM.EP300.T-47D 197 bp overlap
ESR1 11 datasets
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 307 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 533 bp overlap
ChIP MCF-7_vehicle_45min_H2 GSE99626.ESR1.MCF-7_vehicle_45min_H2 313 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 153 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 328 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 437 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 533 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 419 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 302 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 241 bp overlap
ChIP breast_tumor_Male_6 GSE104399.ESR1.breast_tumor_Male_6 199 bp overlap
ETV4 1 dataset
ChIP T-47D GSE129803.ETV4.T-47D 533 bp overlap
EZH2 24 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 232 bp overlap
ChIP GM23248 ENCFF404ZHM 516 bp overlap
ChIP GM23338 ENCFF613YON 533 bp overlap
ChIP H1 ENCFF232NZA 533 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 352 bp overlap
ChIP HepG2 ENCFF912EIW 151 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 155 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 365 bp overlap
ChIP astrocyte ENCFF365JTP 533 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 533 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 322 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 191 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 61 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 533 bp overlap
ChIP fibroblast of lung ENCFF479BAW 241 bp overlap
ChIP fibroblast of lung ENCFF479BAW 222 bp overlap
ChIP hepatocyte ENCFF118DKH 134 bp overlap
ChIP hepatocyte ENCFF552DZB 533 bp overlap
ChIP hepatocyte ENCFF552DZB 533 bp overlap
ChIP neural progenitor cell ENCFF018MKA 533 bp overlap
ChIP neural progenitor cell ENCFF472NFV 533 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 160 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 196 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 80 bp overlap
EZH2_phosphoT487 1 dataset
ChIP DOHH2 ENCSR562NOP.EZH2_phosphoT487.DOHH2 349 bp overlap
FOXA1 6 datasets
ChIP MCF-7 GSE72249.FOXA1.MCF-7 297 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 271 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 160 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 80 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 323 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 200 bp overlap
GATA3 4 datasets
ChIP MCF-7 GSE51274.GATA3.MCF-7 303 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 265 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 412 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 368 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 170 bp overlap
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 193 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-2 336 bp overlap
ChIP foregut GSE117136.GATA4.foregut 241 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 395 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 204 bp overlap
ChIP DE DE-GATA6-2 414 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 388 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 533 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 533 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 498 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 533 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 490 bp overlap
ChIP foregut GSE117136.GATA6.foregut 266 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 235 bp overlap
GATAD2B 1 dataset
ChIP MCF-7 ENCSR979FQP.GATAD2B.MCF-7 259 bp overlap
GRHL2 1 dataset
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 282 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 166 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 179 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 182 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 218 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 506 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 329 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 53 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 505 bp overlap
JUND 4 datasets
ChIP MCF-7 ENCFF450KFZ 338 bp overlap
ChIP MCF-7 ENCSR000BSU.JUND.MCF-7 145 bp overlap
ChIP MCF-7 ENCSR000BSU.JUND.MCF-7 177 bp overlap
ChIP T47D ENCFF318BWX 79 bp overlap
KDM5B 2 datasets
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 209 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 189 bp overlap
KLF4 1 dataset
ChIP MCF-7 GSE41561.KLF4.MCF-7 227 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 83 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCFF169IXS 411 bp overlap
MBD2 1 dataset
ChIP MCF-7 ENCSR940MHE.MBD2.MCF-7 118 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 522 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 52 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 233 bp overlap
MEN1 3 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 352 bp overlap
ChIP MCF-7 GSE85317.MEN1.MCF-7 72 bp overlap
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 50 bp overlap
MLLT1 2 datasets
ChIP MCF-7 ENCSR427BBI.MLLT1.MCF-7 187 bp overlap
ChIP MCF-7 ENCSR427BBI.MLLT1.MCF-7 54 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 322 bp overlap
MYCN 4 datasets
ChIP Kelly GSE94822.MYCN.Kelly 205 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 118 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 189 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 521 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 82 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 140 bp overlap
PCGF2 1 dataset
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 533 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 315 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 68 bp overlap
PML 2 datasets
ChIP MCF-7 ENCFF839EHA 325 bp overlap
ChIP MCF-7 ENCSR000BUZ.PML.MCF-7 533 bp overlap
POLR2A 4 datasets
ChIP MCF-7 ENCFF164XWP 136 bp overlap
ChIP MCF-7 ENCFF309IKZ 175 bp overlap
ChIP MCF-7 ENCFF411WCU 177 bp overlap
ChIP PFSK-1 ENCFF576NIT 510 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 142 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 437 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 533 bp overlap
RAD21 2 datasets
ChIP MCF-7 ENCFF694KOM 337 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 124 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 141 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 303 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 63 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 533 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 319 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 123 bp overlap
SIN3A 3 datasets
ChIP MCF-7 ENCFF521RDC 318 bp overlap
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 533 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 419 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 422 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 428 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 171 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 325 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 533 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 533 bp overlap
SS18 4 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 528 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 252 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 533 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 533 bp overlap
SUZ12 11 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 436 bp overlap
ChIP H1 ENCFF507HGF 88 bp overlap
ChIP H1 ENCFF881NFR 533 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 56 bp overlap
ChIP K-562 ENCSR412CTM.SUZ12.K-562 151 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 63 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 368 bp overlap
ChIP MCF-7 ENCSR757EMK.SUZ12.MCF-7 188 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 139 bp overlap
ChIP NT2/D1 ENCFF574SXS 243 bp overlap
ChIP NT2/D1 ENCFF574SXS 533 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 276 bp overlap
TEAD4 1 dataset
ChIP MCF-7 ENCFF710WPA 291 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 244 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 533 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 154 bp overlap
TSC22D1 1 dataset
ChIP MCF-7 ENCFF552PAC 251 bp overlap
TSC22D2 1 dataset
ChIP MCF-7 ENCFF588BUN 170 bp overlap
ZMYM3 1 dataset
ChIP MCF-7 GSE97661.ZMYM3.MCF-7 533 bp overlap
ZNF217 2 datasets
ChIP MCF-7 ENCFF379OSU 133 bp overlap
ChIP MCF-7 ENCSR465XQW.ZNF217.MCF-7 77 bp overlap
ZNF444 3 datasets
ChIP MCF-7 ENCFF602QFR 169 bp overlap
ChIP MCF-7 ENCFF602QFR 368 bp overlap
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 316 bp overlap
ZNF512B 1 dataset
ChIP MCF-7 ENCSR761LRR.ZNF512B.MCF-7 349 bp overlap
ZNF610 1 dataset
ChIP HEK293T GSE78099.ZNF610.HEK293T 281 bp overlap
ZNF687 1 dataset
ChIP MCF-7 ENCSR899BKM.ZNF687.MCF-7 316 bp overlap
ZSCAN4 1 dataset
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 77 bp overlap
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