chr1 : 179,883,888 – 179,884,046
158 bp 86 TFs 4 linked genes
This 158 bp open chromatin element is linked to 4 target genes and is bound by 86 transcription factors.
Linked Genes
4 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TOR1AIP1 1.2 kb Proximal Proximity
ENSG00000272906 1.3 kb Proximal Proximity
ENSG00000293564 1.6 kb Proximal Proximity
TOR1AIP2 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:179,878,888 – 179,889,046
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 117 bp overlap
ARID1A 1 dataset
ChIP RMG-I GSE120058.ARID1A.RMG-I 80 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 83 bp overlap
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 60 bp overlap
ATF1 5 datasets
ChIP HepG2 ENCFF239LTQ 158 bp overlap
ChIP K-562 ENCSR091GVJ.ATF1.K-562 158 bp overlap
ChIP K-562 ENCSR000DNZ.ATF1.K-562 109 bp overlap
ChIP K562 ENCFF817JQF 158 bp overlap
ChIP K562 ENCFF980NSF 144 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 131 bp overlap
ATF3 6 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 124 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 90 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 158 bp overlap
ChIP K-562 ENCSR000BNU.ATF3.K-562 114 bp overlap
ChIP K562 ENCFF604FPV 158 bp overlap
ChIP K562 ENCFF965VXT 158 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 158 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 158 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 120 bp overlap
BRD4 3 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 76 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 118 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 127 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 153 bp overlap
CREB1 13 datasets
ChIP GM12878 ENCFF870CVH 158 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 158 bp overlap
ChIP GM23338 ENCFF432ZEW 124 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 158 bp overlap
ChIP H1 ENCFF955PMP 128 bp overlap
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 158 bp overlap
ChIP Hep-G2 ENCSR000BVL.CREB1.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF245CBB 158 bp overlap
ChIP HepG2 ENCFF576ERP 158 bp overlap
ChIP HepG2 ENCFF792THT 158 bp overlap
ChIP K-562 ENCSR000BSO.CREB1.K-562 158 bp overlap
ChIP K562 ENCFF175LMX 158 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 158 bp overlap
CREBBP 1 dataset
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 158 bp overlap
CREM 6 datasets
ChIP GM12878 ENCFF391UGE 158 bp overlap
ChIP GM12878 ENCSR839XZU.CREM.GM12878 158 bp overlap
ChIP Hep-G2 ENCSR903ELW.CREM.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF049UDY 158 bp overlap
ChIP K-562 ENCSR077DKV.CREM.K-562 155 bp overlap
ChIP K562 ENCFF180STA 155 bp overlap
CTCF 1 dataset
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.CTCF.peripheral-blood-neutrophil_PMA-1 158 bp overlap
E2F1 2 datasets
ChIP K-562 ENCSR720HUL.E2F1.K-562 158 bp overlap
ChIP K562 ENCFF191BFW 158 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF006PJY 158 bp overlap
ERG 1 dataset
ChIP RWPE-1 GSE114241.ERG.RWPE-1 89 bp overlap
FOS 6 datasets
ChIP CD4 GSE116695.FOS.CD4 158 bp overlap
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 158 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 142 bp overlap
ChIP MCF-7 ENCFF282FWZ 132 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 77 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 158 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR000BMV.FOSL1.K-562 93 bp overlap
ChIP K562 ENCFF728OTE 137 bp overlap
GATA4 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 112 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 158 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR000BMG.HDAC2.K-562 98 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 120 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 84 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 84 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 109 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 103 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 103 bp overlap
JUN 3 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 59 bp overlap
ChIP K-562 ENCSR000FAH.JUN.K-562 57 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 158 bp overlap
JUNB 5 datasets
ChIP CD4 GSE116695.JUNB.CD4 158 bp overlap
ChIP CD4_fly-DNA GSE116695.JUNB.CD4_fly-DNA 158 bp overlap
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 158 bp overlap
ChIP GM12878 ENCFF667EJQ 158 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 146 bp overlap
JUND 3 datasets
ChIP HCT116 ENCFF748ZQX 133 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 77 bp overlap
ChIP K562 ENCFF336RCR 158 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCFF326EGX 138 bp overlap
KLF13 1 dataset
ChIP HEK293 ENCSR946ZLI.KLF13.HEK293 158 bp overlap
KMT2A 2 datasets
ChIP MV4-11 GSE83671.KMT2A.MV4-11 152 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 158 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 151 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 129 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 158 bp overlap
ChIP K562 ENCFF320GSD 91 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 124 bp overlap
MLLT1_FKB 1 dataset
ChIP MV4-11 GSE82116.MLLT1_FKB.MV4-11 91 bp overlap
MTA1 2 datasets
ChIP K-562 ENCSR807BGP.MTA1.K-562 158 bp overlap
ChIP K562 ENCFF230ZKA 146 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 150 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 73 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 79 bp overlap
NFYB 3 datasets
ChIP GM12878 ENCFF474DNH 158 bp overlap
ChIP GM12878 ENCSR000DNM.NFYB.GM12878 158 bp overlap
ChIP K-562 GSE26439.NFYB.K-562 158 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 111 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 158 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF239KMA 158 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 158 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 134 bp overlap
PAX5 4 datasets
ChIP GM12878 ENCFF482PUW 145 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 118 bp overlap
ChIP GM12891 ENCFF490KVF 146 bp overlap
ChIP GM12891 ENCSR000BJH.PAX5.GM12891 103 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 112 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 100 bp overlap
PKNOX1 3 datasets
ChIP GM12878 ENCFF589FCY 158 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 158 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 158 bp overlap
POLR2A 5 datasets
ChIP GM12878 ENCFF263VRI 158 bp overlap
ChIP GM12878 ENCFF412KAE 158 bp overlap
ChIP GM12878 ENCFF412KAE 158 bp overlap
ChIP GM12892 ENCFF506PGQ 158 bp overlap
ChIP GM15510 ENCFF880HVJ 158 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 116 bp overlap
POU2F2 2 datasets
ChIP GM12878 ENCFF207RKY 158 bp overlap
ChIP GM12891 ENCSR000BII.POU2F2.GM12891 143 bp overlap
RAD51 2 datasets
ChIP GM12878 ENCFF916JXQ 158 bp overlap
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 158 bp overlap
RBPJ 4 datasets
ChIP CUTLL1 GSE29600.RBPJ.CUTLL1 117 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 124 bp overlap
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 110 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 106 bp overlap
RELA 2 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 158 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 158 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 133 bp overlap
RUNX1 1 dataset
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 158 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 156 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 124 bp overlap
SIX5 1 dataset
ChIP H1 ENCFF942SOJ 67 bp overlap
SMAD3 3 datasets
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 85 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 158 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 122 bp overlap
SMARCA4 7 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 106 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 60 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 158 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 102 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 54 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 158 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 158 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 90 bp overlap
SRF 6 datasets
ChIP GM12878 ENCFF565AWY 103 bp overlap
ChIP GM12878 ENCFF878IIX 158 bp overlap
ChIP GM12878 ENCSR041XML.SRF.GM12878 152 bp overlap
ChIP GM12878 ENCSR000BMI.SRF.GM12878 95 bp overlap
ChIP Hep-G2 ENCSR000BLV.SRF.Hep-G2 106 bp overlap
ChIP K562 ENCFF664RPC 110 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 125 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 127 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 127 bp overlap
STAT3 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 66 bp overlap
TAF1 1 dataset
ChIP GM12891 ENCFF254YPA 152 bp overlap
TBP 2 datasets
ChIP GM12878 ENCFF571OXR 149 bp overlap
ChIP hESC GSE122298.TBP.hESC 122 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 158 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 144 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 146 bp overlap
USF1 4 datasets
ChIP H1 ENCFF090WVU 158 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 132 bp overlap
ChIP K562 ENCFF633EZB 158 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 152 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 158 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 158 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 113 bp overlap
YY1 2 datasets
ChIP GM12891 ENCFF460SIS 158 bp overlap
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 97 bp overlap
ZBTB21 3 datasets
ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 140 bp overlap
ChIP Hep-G2 ENCSR549PAU.ZBTB21.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF276JLT 102 bp overlap
ZBTB40 4 datasets
ChIP GM12878 ENCFF346DYM 158 bp overlap
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 142 bp overlap
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 158 bp overlap
ChIP K562 ENCFF521DSV 89 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 58 bp overlap
ZEB1 1 dataset
ChIP RKO GSE88734.ZEB1.RKO 158 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 158 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 158 bp overlap
ChIP K562 ENCFF795CMH 158 bp overlap
ChIP K562 ENCFF975RXS 158 bp overlap
ZNF184 1 dataset
ChIP K-562 ENCSR621ATC.ZNF184.K-562 128 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCFF096ELQ 158 bp overlap
ZNF740 1 dataset
ChIP K562 ENCFF913GVQ 157 bp overlap
ZSCAN21 1 dataset
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 158 bp overlap
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