chr9 : 94,746,310 94,746,827
517 bp 82 TFs 2 linked genes
This 517 bp open chromatin element is linked to AOPEP and PCAT7 and is bound by 82 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
AOPEP 19.9 kb Distal Multiome
PCAT7 191.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:94,741,310 – 94,751,827
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 165 bp overlap
ARID3A 2 datasets
ChIP Hep-G2 GSE97661.ARID3A.Hep-G2 81 bp overlap
ChIP HepG2 ENCFF341DES 360 bp overlap
ARNT 2 datasets
ChIP 501-mel GSE95280.ARNT.501-mel 69 bp overlap
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 365 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 78 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 224 bp overlap
BRD4 2 datasets
ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 223 bp overlap
ChIP CHL-1_OTX015 GSE95585.BRD4.CHL-1_OTX015 275 bp overlap
CDK9 1 dataset
ChIP A-375 GSE128080.CDK9.A-375 82 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 165 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 247 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 192 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 403 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF680YXW 166 bp overlap
EGR1 2 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 165 bp overlap
ChIP fibroblast_DOX-CLOB-24h GSE134924.EGR1.fibroblast_DOX-CLOB-24h 223 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 285 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 333 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 186 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 89 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 270 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 318 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 159 bp overlap
FOXA1 4 datasets
ChIP HepG2 ENCFF207NVJ 249 bp overlap
ChIP HepG2 ENCFF361KNY 225 bp overlap
ChIP HepG2 ENCFF740VZW 88 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 249 bp overlap
FOXA2 11 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 251 bp overlap
ChIP DE DE-FOXA2-1 511 bp overlap
ChIP DE DE-FOXA2-2 423 bp overlap
ChIP HepG2 ENCFF533COJ 104 bp overlap
ChIP HepG2 ENCFF570ABM 178 bp overlap
ChIP HepG2 ENCFF894AYY 170 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 269 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 170 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 282 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 144 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 232 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 290 bp overlap
FOXP1 2 datasets
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 226 bp overlap
ChIP HepG2 ENCFF823ERM 267 bp overlap
FOXP4 2 datasets
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 267 bp overlap
ChIP HepG2 ENCFF462ULY 341 bp overlap
GATA2 9 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 274 bp overlap
ChIP HepG2 ENCFF905PYM 326 bp overlap
ChIP SH-SY5Y ENCFF485YIB 317 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 327 bp overlap
ChIP SK-N-SH ENCFF764OZD 355 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 225 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 181 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 189 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
GATA3 2 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 269 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 277 bp overlap
GATA4 11 datasets
ChIP A-549 GSE85002.GATA4.A-549 229 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 517 bp overlap
ChIP DE DE-GATA4-2 517 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 517 bp overlap
ChIP Hep-G2 ENCSR590CNM.GATA4.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF309FOQ 385 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 347 bp overlap
ChIP foregut GSE117136.GATA4.foregut 517 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 517 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 492 bp overlap
GATA6 22 datasets
ChIP AGS GSE51705.GATA6.AGS 354 bp overlap
ChIP AGS GSE51936.GATA6.AGS 213 bp overlap
ChIP Caco-2_DIFF GSE23436.GATA6.Caco-2_DIFF 96 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 160 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 270 bp overlap
ChIP DE DE-GATA6-1 517 bp overlap
ChIP DE DE-GATA6-2 517 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 517 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 517 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 507 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 517 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 517 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 517 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 145 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 223 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 499 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 517 bp overlap
ChIP foregut GSE117136.GATA6.foregut 517 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 454 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 446 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 492 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 407 bp overlap
GFI1 3 datasets
ChIP Hep-G2 ENCSR849FVL.GFI1.Hep-G2 226 bp overlap
ChIP HepG2 ENCFF472INF 365 bp overlap
ChIP HepG2 ENCFF472INF 126 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 335 bp overlap
HBP1 1 dataset
ChIP Hep-G2 ENCSR616WEG.HBP1.Hep-G2 126 bp overlap
HDAC2 1 dataset
ChIP HepG2 ENCFF990GUQ 363 bp overlap
HHEX 2 datasets
ChIP Hep-G2 ENCSR656JZL.HHEX.Hep-G2 178 bp overlap
ChIP HepG2 ENCFF618PVM 263 bp overlap
HNF4A 2 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 143 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 154 bp overlap
HOXB8 1 dataset
ChIP PANC-1 GSE119930.HOXB8.PANC-1 348 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 176 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 274 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 339 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 472 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 368 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 408 bp overlap
KDM1A 3 datasets
ChIP HepG2 ENCFF240UWG 390 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 355 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 262 bp overlap
MNX1 2 datasets
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 228 bp overlap
ChIP HepG2 ENCFF938KYA 401 bp overlap
NFE2L2 1 dataset
ChIP A-375_DMSO GSE57431.NFE2L2.A-375_DMSO 144 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 282 bp overlap
NR2F6 1 dataset
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 151 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 116 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 70 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 326 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 267 bp overlap
PCBP2 1 dataset
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 172 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 227 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 242 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 517 bp overlap
PITX1 2 datasets
ChIP HepG2 ENCFF468QTQ 345 bp overlap
ChIP HepG2 ENCFF468QTQ 144 bp overlap
POLR2A 2 datasets
ChIP neural cell ENCFF604SPB 385 bp overlap
ChIP neural cell ENCFF604SPB 245 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 266 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 320 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 265 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 280 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 359 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 360 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 336 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 336 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 180 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 467 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 497 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 517 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 395 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 371 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 422 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 394 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 381 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 161 bp overlap
SMARCA4 5 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 517 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 108 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 153 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 259 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 221 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 405 bp overlap
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 212 bp overlap
SP5 2 datasets
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 203 bp overlap
ChIP HepG2 ENCFF931FHV 311 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 262 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 254 bp overlap
TBX2 2 datasets
ChIP Hep-G2 ENCSR410FEH.TBX2.Hep-G2 279 bp overlap
ChIP HepG2 ENCFF811TLA 415 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 395 bp overlap
TCF7L2 4 datasets
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 246 bp overlap
ChIP Hep-G2 ENCSR346BOD.TCF7L2.Hep-G2 212 bp overlap
ChIP HepG2 ENCFF510OLG 377 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 263 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 310 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 414 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 494 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 211 bp overlap
ZFHX3 1 dataset
ChIP HepG2 ENCFF082SJV 332 bp overlap
ZFP82 1 dataset
ChIP HepG2 ENCFF665HBX 271 bp overlap
ZNF609 2 datasets
ChIP Hep-G2 ENCSR407BPU.ZNF609.Hep-G2 204 bp overlap
ChIP HepG2 ENCFF900FRP 370 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 139 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 240 bp overlap