chr8 : 104,028,764 – 104,029,469
705 bp 110 TFs 1 linked gene
This 705 bp open chromatin element is linked to RIMS2 and is bound by 110 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RIMS2 528.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:104,023,764 – 104,034,469
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
110 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 571 bp overlap
ATF2 4 datasets
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP H1 ENCFF295GZO 408 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 223 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 136 bp overlap
Atoh1 1 dataset
Motif ES_0h ES_0h-Atoh1_MA0461.3 8 bp overlap
BCL6 1 dataset
Motif ES_0h ES_0h-BCL6_MA0463.3 13 bp overlap
CDX1 1 dataset
Motif ES_0h ES_0h-CDX1_MA0878.3 10 bp overlap
CDX4 1 dataset
Motif ES_0h ES_0h-CDX4_MA1473.2 9 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 168 bp overlap
ChIP H1 ENCFF126NLU 597 bp overlap
ChIP H1 ENCFF126NLU 443 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 154 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 280 bp overlap
DPF2 1 dataset
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 311 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 233 bp overlap
E2F7 1 dataset
Motif ES_0h ES_0h-E2F7_MA0758.1 14 bp overlap
EHF 1 dataset
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 270 bp overlap
ERF::SREBF2 1 dataset
Motif ES_0h ES_0h-ERFSREBF2_MA1939.2 16 bp overlap
ESR1 1 dataset
Motif ES_0h ES_0h-ESR1_MA0112.4 15 bp overlap
ETV1 1 dataset
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
Elf5 1 dataset
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FOXE1 1 dataset
Motif ES_0h ES_0h-FOXE1_MA1487.3 12 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXN3 1 dataset
Motif ES_0h ES_0h-FOXN3_MA1489.1 8 bp overlap
Foxl2 1 dataset
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
GABPA 1 dataset
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
GATA1::TAL1 1 dataset
Motif ES_0h ES_0h-GATA1TAL1_MA0140.3 17 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF939VKA 237 bp overlap
HOXA10 1 dataset
Motif ES_0h ES_0h-HOXA10_MA0899.2 9 bp overlap
HOXB13 1 dataset
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
HOXD9 1 dataset
Motif ES_0h ES_0h-HOXD9_MA0913.3 9 bp overlap
HSF4 1 dataset
Motif ES_0h ES_0h-HSF4_MA0771.1 13 bp overlap
Hoxa13 1 dataset
Motif ES_0h ES_0h-Hoxa13_MA0650.4 8 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
IRF7 1 dataset
Motif ES_0h ES_0h-IRF7_MA0772.2 13 bp overlap
ISL2 1 dataset
Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap
Ikzf3 1 dataset
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
Irf1 2 datasets
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 499 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 453 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 488 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 538 bp overlap
JUND 2 datasets
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP H1 ENCFF010YXS 221 bp overlap
MAF::NFE2 1 dataset
Motif ES_0h ES_0h-MAFNFE2_MA0501.2 11 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 385 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 705 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Msgn1 1 dataset
Motif ES_0h ES_0h-Msgn1_MA1524.3 10 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 189 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 705 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 454 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 148 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 680 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 705 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 255 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
Nfe2l2 1 dataset
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
Nr1h3::Rxra 1 dataset
Motif ES_0h ES_0h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr2e1 1 dataset
Motif ES_0h ES_0h-Nr2e1_MA0676.1 9 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 631 bp overlap
ChIP H1 ENCFF833NJP 411 bp overlap
POU1F1 1 dataset
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 1 dataset
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 1 dataset
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU3F2 1 dataset
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 7 datasets
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 705 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 399 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 195 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 390 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 705 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 446 bp overlap
POU5F1B 1 dataset
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
PPARG 1 dataset
Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap
Pou5f1::Sox2 1 dataset
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RARA 1 dataset
Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap
RARA::RXRA 1 dataset
Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap
RARA::RXRG 1 dataset
Motif ES_0h ES_0h-RARARXRG_MA1149.2 17 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RFX7 1 dataset
Motif ES_0h ES_0h-RFX7_MA1554.2 8 bp overlap
SATB1 1 dataset
Motif ES_0h ES_0h-SATB1_MA1963.2 7 bp overlap
SIX1 1 dataset
Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 241 bp overlap
SMAD2_3 1 dataset
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 388 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 223 bp overlap
SMARCC1 1 dataset
ChIP ESC S25-ESC-d0-BAF155-exp1 347 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 518 bp overlap
SOX4 1 dataset
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 256 bp overlap
SRF 3 datasets
Motif ES_0h ES_0h-SRF_MA0083.3 16 bp overlap
ChIP H1 ENCFF036PEF 57 bp overlap
ChIP WA01 ENCSR000BIV.SRF.WA01 241 bp overlap
STAT1 3 datasets
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT1::STAT2 1 dataset
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
STAT3 2 datasets
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
Sox11 1 dataset
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Stat2 1 dataset
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
Stat4 2 datasets
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
Stat5a 2 datasets
Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap
Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap
Stat5a::Stat5b 2 datasets
Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 2 datasets
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 254 bp overlap
TBP 3 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP H1 ENCFF859IIO 295 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 181 bp overlap
TEAD1 2 datasets
ChIP CCLP1 GSE62272.TEAD1.CCLP1 306 bp overlap
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD4 3 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 556 bp overlap
ChIP H1 ENCFF778PAX 75 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 238 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 155 bp overlap
Tfcp2l1 1 dataset
Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 134 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 419 bp overlap
Yy1 1 dataset
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZBTB18 1 dataset
Motif ES_0h ES_0h-ZBTB18_MA0698.2 11 bp overlap
ZFP42 1 dataset
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZIM3 1 dataset
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZKSCAN5 1 dataset
Motif ES_0h ES_0h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF175 1 dataset
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 497 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 231 bp overlap
ZNF462 3 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 185 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 343 bp overlap
ZNF532 2 datasets
ChIP WTC11 ENCFF373VBX 140 bp overlap
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF547 2 datasets
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
ZNF684 1 dataset
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 257 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
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